RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 FSHBP01225 129 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 SDC2P34741 201 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 PRB3Q04118 309 aaPredicted RBP17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 C1orf122Q6ZSJ8 110 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 ZFAND2BQ8WV99 257 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 ZNF714Q96N38 554 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 LINC00312Q9Y6C7 94 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 NAV3Q8IVL0 2385 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 TRGV10A0A0A0MS01 117 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A10PA6NDY2 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A18PA6NE21 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A16PA6NEW6 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A20PA6NIJ5 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A8PA6NJQ4 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A7PA6NKC0 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A22PA8MWA6 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 TMEM14DPA8MWL7 114 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A12PA8MX19 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A5PA8MXJ8 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A23PA8MXZ1 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 MCRIP1C9JLW8 97 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A15PP0C7V4 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A13PP0C7W8 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A14PP0C7W9 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM90A24PP0C7X0 464 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 ZNF728P0DKX0 622 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 FPR2P25090 351 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 KCNJ3P48549 501 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 DLX1P56177 255 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 LSM3P62310 102 aaKnown RBP17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 RPS27AP62979 156 aaKnown RBP17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 UNC119Q13432 240 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 C2orf76Q3KRA6 126 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 COQ2Q96H96 371 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 PEX16Q9Y5Y5 336 aa17.09■□□□□ 0.33
SMARCB1-202ENST00000344921 CENPVL3A0A0U1RRI6 287 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 ODAMA1E959 279 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 RBM39Q14498 530 aaKnown RBP17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 RAB12Q6IQ22 244 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 BRD3OSQ6XYD6 125 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 OR2W3Q7Z3T1 314 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 OR13F1Q8NGS4 319 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 URM1Q9BTM9 101 aaKnown RBP17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 FUNDC2Q9BWH2 189 aa17.08■□□□□ 0.32
SMARCB1-202ENST00000344921 MEIKINA0A087WXM9 373 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 NOTOA8MTQ0 251 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 H3BUI4 141 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 AIPO00170 330 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 FUT3P21217 361 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 PRTN3P24158 256 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 QRFPP83859 136 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 NR2C2APQ86WQ0 139 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 LIN7BQ9HAP6 207 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 ZNF69Q9UC07 566 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 KIF25Q9UIL4 384 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 UBE2J1Q9Y385 318 aaPredicted RBP17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 DSCAML1Q8TD84 2053 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 MXRA5Q9NR99 2828 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 CUBNO60494 3623 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 ERVFRD-1P60508 538 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 NKAPLQ5M9Q1 402 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 TCF23Q7RTU1 214 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 ZNF565Q8N9K5 539 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 PLPPR1Q8TBJ4 325 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 NEDD4LQ96PU5 975 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 OR6C3Q9NZP0 311 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 DAPK2Q9UIK4 370 aa17.07■□□□□ 0.32
SMARCB1-202ENST00000344921 SLC2A2P11168 524 aaPredicted RBP17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 GUCA2AQ02747 115 aa17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 KLRD1Q13241 179 aa17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 RUSC1-AS1Q66K80 236 aa17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 NCR3LG1Q68D85 454 aa17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 ZNF782Q6ZMW2 699 aaPredicted RBP17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 NICN1Q9BSH3 213 aa17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 GAL3ST2Q9H3Q3 398 aa17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 RCC2Q9P258 522 aaKnown RBP17.06■□□□□ 0.32
SMARCB1-202ENST00000344921 IGHV1-69DA0A0B4J2H0 117 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 TMEM272A0A1B0GTI8 110 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 PDCD6O75340 191 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 IGHV1-69P01742 117 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 CLEC2LP0C7M8 214 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 TGFBR1P36897 503 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 GLP1RP43220 463 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 BPIFB3P59826 476 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 SIGIRRQ6IA17 410 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 SFXN4Q6P4A7 337 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 C11orf42Q8N5U0 333 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 SLC6A7Q99884 636 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 TM2D1Q9BX74 207 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 HEXA-AS1Q9H8Q6 139 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 ETAA1Q9NY74 926 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 KIAA2026Q5HYC2 2103 aa17.05■□□□□ 0.32
SMARCB1-202ENST00000344921 A0A0B4J203 849 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 A0A1W2PRD5 423 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 A0A1W2PRF3 423 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 A0A1W2PRM7 423 aa17.04■□□□□ 0.32
SMARCB1-202ENST00000344921 UBE2QL1A1L167 161 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms