RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 ZNF816Q0VGE8 651 aaPredicted RBP10.37□□□□□ -0.75
USP1-201ENST00000339950 DHRS11Q6UWP2 260 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 NRIP2Q9BQI9 281 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 NSG2Q9Y328 171 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 A0A1B0GV90 55 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 BTBD17A6NE02 478 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 SERPINE3A8MV23 424 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 JTBO76095 146 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 NXPH2O95156 264 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 CD8AP01732 235 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 CCL11P51671 97 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 NFAM1Q8NET5 270 aaPredicted RBP10.37□□□□□ -0.75
USP1-201ENST00000339950 MOB1AQ9H8S9 216 aa10.37□□□□□ -0.75
USP1-201ENST00000339950 A0A087X0M5 115 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 LOC102725191A0A1B0GVB3 256 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 A0A1B0GX30 115 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 GJE1A6NN92 205 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 LYZL6O75951 148 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 LIFP15018 202 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 HOXC12P31275 282 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 THBS4P35443 961 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 SUPT4H1P63272 117 aaKnown RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 DEFB108BQ8NET1 73 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 OR4A4PQ8NGN8 299 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 OR1J1Q8NGS3 322 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 PP6455Q8WZ26 134 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 MRGPRFQ96AM1 343 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 MMP26Q9NRE1 261 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 SLC2A8Q9NY64 477 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 SHISA7A6NL88 538 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 CEBPZOSA8MTT3 80 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 MFNGO00587 321 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 YKT6O15498 198 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 SYNGR1O43759 233 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 ISG15P05161 165 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 UBE2NP61088 152 aaKnown RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 ENDOGQ14249 297 aaKnown RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 FAM166AQ6J272 317 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 FDX2Q6P4F2 183 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 WDR74Q6RFH5 385 aaPredicted RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 OR10V1Q8NGI7 309 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 GSN-AS1Q9NRJ2 163 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 CHCHD2Q9Y6H1 151 aaPredicted RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 DENND4AQ7Z401 1863 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 EML6Q6ZMW3 1958 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 ZNF587BE7ETH6 402 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 MT-ND4LP03901 98 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 RPS2P15880 293 aaKnown RBP10.36□□□□□ -0.75
USP1-201ENST00000339950 CALCRP30988 508 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 PRDX4Q13162 271 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 ZNF345Q14585 488 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 OR2V1Q8NHB1 315 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 CHST5Q9GZS9 411 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 ABI3Q9P2A4 366 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 WASF3Q9UPY6 502 aa10.36□□□□□ -0.75
USP1-201ENST00000339950 GABRA2P47869 451 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 TBC1D26Q86UD7 250 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 PHYHIPLQ96FC7 376 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 MRPL13Q9BYD1 178 aaKnown RBP10.35□□□□□ -0.75
USP1-201ENST00000339950 NAA60Q9H7X0 242 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 C19orf12Q9NSK7 152 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 STARD10Q9Y365 291 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 EML5Q05BV3 1969 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 F8VVB4 439 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 F8VWA3 439 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 HKR1P10072 659 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 MMP9P14780 707 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 FUT3P21217 361 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 SUMO3P55854 103 aaPredicted RBP10.35□□□□□ -0.75
USP1-201ENST00000339950 MPV17LQ2QL34 196 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 APH1AQ96BI3 265 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 B4GALT7Q9UBV7 327 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 C9JQL5 133 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 E5RGE8 158 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 CHST1O43916 411 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 CST4P01036 141 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 FCGR3AP08637 254 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 RAC1P63000 192 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 RNF151Q2KHN1 245 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 UQCC3Q6UW78 93 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 TMEM105Q8N8V8 129 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 ATRXP46100 2492 aa10.35□□□□□ -0.75
USP1-201ENST00000339950 CXorf65A6NEN9 183 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 LINC01387J3KSC0 135 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 AP4M1O00189 453 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 DEGS1O15121 323 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 VAMP5O95183 116 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 IL2RGP31785 369 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 RPL29P47914 159 aaKnown RBP10.34□□□□□ -0.75
USP1-201ENST00000339950 DUSP3P51452 185 aaPredicted RBP10.34□□□□□ -0.75
USP1-201ENST00000339950 ZNF133P52736 654 aaPredicted RBP10.34□□□□□ -0.75
USP1-201ENST00000339950 ZNF343Q6P1L6 599 aa10.34□□□□□ -0.75
USP1-201ENST00000339950 SNX22Q96L94 193 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms