RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 ABLIM2Q6H8Q1 611 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 SNHG12Q9BXW3 62 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 ZNF286AQ9HBT8 521 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 A0A0U1RQV5 110 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 CHST1O43916 411 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 DFFBO76075 338 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 HLA-HP01893 362 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 SRD5A3Q9H8P0 318 aa17.61■□□□□ 0.41
RUNX3-202ENST00000338888 OR2J2O76002 312 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 IGHV4-34P06331 123 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 BCL2P10415 239 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 CEACAM1P13688 526 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 UCP3P55916 312 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 KCNMB1Q16558 191 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 RSPO1Q2MKA7 263 aaPredicted RBP17.6■□□□□ 0.41
RUNX3-202ENST00000338888 SPIN3Q5JUX0 258 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.6■□□□□ 0.41
RUNX3-202ENST00000338888 SLC25A24Q6NUK1 477 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 CISD1Q9NZ45 108 aaKnown RBP17.6■□□□□ 0.41
RUNX3-202ENST00000338888 TRIOBPQ9H2D6 2365 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 CNTRLQ7Z7A1 2325 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 IGKV1-27A0A075B6S5 117 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 TCRBV21S2A2A0A5A6 115 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 SOX15O60248 233 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 PPYP01298 95 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 DRD1P21728 446 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 CTSSP25774 331 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 CLEC12BQ2HXU8 276 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 TBC1D26Q86UD7 250 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 SELENOHQ8IZQ5 122 aaKnown RBP17.6■□□□□ 0.41
RUNX3-202ENST00000338888 NAT6Q93015 286 aa17.6■□□□□ 0.41
RUNX3-202ENST00000338888 GCGP01275 180 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 MMP7P09237 267 aaPredicted RBP17.59■□□□□ 0.41
RUNX3-202ENST00000338888 OR4A8P0C604 315 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 FBLP22087 321 aaKnown RBP17.59■□□□□ 0.41
RUNX3-202ENST00000338888 ZNF41P51814 821 aaPredicted RBP17.59■□□□□ 0.41
RUNX3-202ENST00000338888 ZNF787Q6DD87 383 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 Q6ZPA2 131 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 POC1BQ8TC44 478 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 THOC3Q96J01 351 aaKnown RBP17.59■□□□□ 0.41
RUNX3-202ENST00000338888 ATP5SQ99766 215 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 SPIN2AQ99865 258 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 SPIN2BQ9BPZ2 258 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 RPRMQ9NS64 109 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 LAMP3Q9UQV4 416 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 H3BP45 60 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 NR2C1P13056 603 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 GNRHRP30968 328 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 SNAI3Q3KNW1 292 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 ZNF66Q6ZN08 573 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 OR2AE1Q8NHA4 323 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 VSIRQ9H7M9 311 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 KLRF1Q9NZS2 232 aa17.59■□□□□ 0.41
RUNX3-202ENST00000338888 ERVS71-1P61550 626 aa17.58■□□□□ 0.41
RUNX3-202ENST00000338888 DPPA3Q6W0C5 159 aa17.58■□□□□ 0.41
RUNX3-202ENST00000338888 SIGLEC12Q96PQ1 595 aa17.58■□□□□ 0.41
RUNX3-202ENST00000338888 GUCA1AP43080 201 aaPredicted RBP17.58■□□□□ 0.4
RUNX3-202ENST00000338888 SRPXP78539 464 aa17.58■□□□□ 0.4
RUNX3-202ENST00000338888 BAXQ07812 192 aa17.58■□□□□ 0.4
RUNX3-202ENST00000338888 ADIRFQ15847 76 aa17.58■□□□□ 0.4
RUNX3-202ENST00000338888 H1FOOQ8IZA3 346 aaPredicted RBP17.58■□□□□ 0.4
RUNX3-202ENST00000338888 RSG1Q9BU20 258 aa17.58■□□□□ 0.4
RUNX3-202ENST00000338888 TRAV1-1A0A0B4J248 108 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 CLDN17P56750 224 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 ID3Q02535 119 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 HIST3H3Q16695 136 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 FAM180AQ6UWF9 173 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 GJC3Q8NFK1 279 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 DNASE2BQ8WZ79 361 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 TMEM56Q96MV1 263 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 CTDSP1Q9GZU7 261 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 HIPK2Q9H2X6 1198 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 CBLN4Q9NTU7 201 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 TMEM56-RWDD3S4R434 201 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 CEBPZOSA8MTT3 80 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 M0R135 149 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 C16orf82Q7Z2V1 217 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 ZNF799Q96GE5 643 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 OXGR1Q96P68 337 aa17.57■□□□□ 0.4
RUNX3-202ENST00000338888 H3BMH7 237 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 TK1P04183 234 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 PFN1P07737 140 aaKnown RBP17.56■□□□□ 0.4
RUNX3-202ENST00000338888 GZMHP20718 246 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 SUMO3P55854 103 aaPredicted RBP17.56■□□□□ 0.4
RUNX3-202ENST00000338888 MRPS21P82921 87 aaKnown RBP17.56■□□□□ 0.4
RUNX3-202ENST00000338888 MRPS34P82930 218 aaKnown RBP17.56■□□□□ 0.4
RUNX3-202ENST00000338888 SLC25A26Q70HW3 274 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 BATF2Q8N1L9 274 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 TPSD1Q9BZJ3 242 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 SLC7A10Q9NS82 523 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 IGKV1-12A0A0C4DH73 117 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 IGKV1D-12P01611 117 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 SFTPCP11686 197 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 ZNF25P17030 456 aaPredicted RBP17.56■□□□□ 0.4
RUNX3-202ENST00000338888 MSR1P21757 451 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 PAX9P55771 341 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 PAX5Q02548 391 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 PMS2P11Q13670 270 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 PLPPR5Q32ZL2 321 aa17.56■□□□□ 0.4
RUNX3-202ENST00000338888 Q6ZS52 159 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms