RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 NBASA2RRP1 2371 aa19.69■□□□□ 0.74
CLPTM1-201ENST00000337392 GRPP07492 148 aa19.69■□□□□ 0.74
CLPTM1-201ENST00000337392 PPP1CBP62140 327 aa19.69■□□□□ 0.74
CLPTM1-201ENST00000337392 TBC1D28Q2M2D7 210 aa19.69■□□□□ 0.74
CLPTM1-201ENST00000337392 NAA60Q9H7X0 242 aa19.69■□□□□ 0.74
CLPTM1-201ENST00000337392 LHX6Q9UPM6 363 aa19.69■□□□□ 0.74
CLPTM1-201ENST00000337392 SIRPB1O00241 398 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 IGHG3P01860 377 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 ZNF44P15621 663 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 CD82P27701 267 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 TMEM187Q14656 261 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 GABRA6Q16445 453 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 PRSS54Q6PEW0 395 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 ZNF826PQ6ZT77 177 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 OR1J1Q8NGS3 322 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 SNTB1Q13884 538 aaKnown RBP19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 IL1F10Q8WWZ1 152 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 DLL3Q9NYJ7 618 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 TINAGQ9UJW2 476 aa19.68■□□□□ 0.74
CLPTM1-201ENST00000337392 IGF2RP11717 2491 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 HSD17B6O14756 317 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 LRP3O75074 770 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 GNRHRP30968 328 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 PSG7Q13046 419 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 TMEM211Q6ICI0 200 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 FAM53AQ6NSI3 398 aaPredicted RBP19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 ZNF818PQ6ZRF7 136 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 ZGRF1Q86YA3 2104 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 BARX1Q9HBU1 254 aaPredicted RBP19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 Q9N2K0 584 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 PFDN2Q9UHV9 154 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 TRBV6-7A0A0A0MS04 114 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 ASCL1P50553 236 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 HERV-K104P61576 105 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 GNG3P63215 75 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 CYCSP99999 105 aaKnown RBP19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 FAM209BQ5JX69 171 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 MOB3AQ96BX8 217 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 ESRP2Q9H6T0 727 aaKnown RBP19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 CDH20Q9HBT6 801 aa19.67■□□□□ 0.74
CLPTM1-201ENST00000337392 TRAV17A0A0B4J275 112 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 NAPSAO96009 420 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 RPL7L1Q6DKI1 246 aaKnown RBP19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 FAM58AQ8N1B3 248 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 Q8NFD4 153 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 NANOS1Q8WY41 292 aaKnown RBP19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 SHARPINQ9H0F6 387 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 OR51I2Q9H344 312 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 SPTA1P02549 2419 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 SCCPDHQ8NBX0 429 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 OR1S2Q8NGQ3 325 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 PARP12Q9H0J9 701 aaKnown RBP19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 ASF1BQ9NVP2 202 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 DKK4Q9UBT3 224 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 PRELID3BQ9Y3B1 194 aa19.66■□□□□ 0.74
CLPTM1-201ENST00000337392 WNT9BO14905 357 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 GLP1RP43220 463 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 ZNF154Q13106 437 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 GAPTQ8N292 157 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 ZNF610Q8N9Z0 462 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 WNT2BQ93097 391 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 Q6ZT83 130 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 SLC35G3Q8N808 338 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 MSI2Q96DH6 328 aaKnown RBP19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 C12orf57Q99622 126 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 CCL28Q9NRJ3 127 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 SPTBN4Q9H254 2564 aa19.65■□□□□ 0.74
CLPTM1-201ENST00000337392 MBPP02686 304 aaPredicted RBP19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 FABP6P51161 128 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 IGFL2Q6UWQ7 119 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 BVESQ8NE79 360 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 MRPL30Q8TCC3 161 aaKnown RBP19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 ADAT1Q9BUB4 502 aaKnown RBP19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 MSL2Q9HCI7 577 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 PCDHB16Q9NRJ7 776 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 RCC2Q9P258 522 aaKnown RBP19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 OR14J1Q9UGF5 321 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 HKR1P10072 659 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 UCP2P55851 309 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 PAN3Q58A45 887 aaKnown RBP19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 SEM1Q6ZVN7 128 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 ERGIC1Q969X5 290 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 KIRREL1Q96J84 757 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 CNTNAP3BQ96NU0 1288 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 CNTNAP3Q9BZ76 1288 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 OR1A1Q9P1Q5 309 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 LRBAP50851 2863 aa19.64■□□□□ 0.73
CLPTM1-201ENST00000337392 CHD3Q12873 2000 aaKnown RBP19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 ZP3P21754 424 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 ZNF573Q86YE8 665 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 UFSP2Q9NUQ7 469 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 PCDHB10Q9UN67 800 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 KCNIP3Q9Y2W7 256 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 FBXO24O75426 580 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 RPL35P42766 123 aaKnown RBP19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 TGFBR3Q03167 851 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 WDR31Q8NA23 367 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 PLPPR1Q8TBJ4 325 aa19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 KLF14Q8TD94 323 aaPredicted RBP19.63■□□□□ 0.73
CLPTM1-201ENST00000337392 SLC5A7Q9GZV3 580 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms