RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 A0A1W2PQ09 198 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 SCGNO76038 276 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 BLVRBP30043 206 aaPredicted RBP12.69□□□□□ -0.38
SEC13-201ENST00000337354 AESQ08117 197 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 EDDM3AQ14507 147 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 KRBOX4Q5JUW0 171 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 TMEM200BQ69YZ2 307 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 CMTM4Q8IZR5 234 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 BPIFB2Q8N4F0 458 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 KIR3DL3Q8N743 410 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 ZNF565Q8N9K5 539 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 OR4M1Q8NGD0 313 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 ACOT12Q8WYK0 555 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 KCNK15Q9H427 330 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 C19orf12Q9NSK7 152 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 NDUFA13Q9P0J0 144 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 HSF4Q9ULV5 492 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 SPATA2Q9UM82 520 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 AUP1Q9Y679 476 aa12.69□□□□□ -0.38
SEC13-201ENST00000337354 A0A0B4J203 849 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 hCG_1809904A0A1W2PP81 198 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 A0A1W2PPE2 198 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 A0A1W2PR64 198 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 A0A1W2PRV1 198 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 INAFM1C9JVW0 142 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 ZNF701M0R085 212 aaPredicted RBP12.68□□□□□ -0.38
SEC13-201ENST00000337354 M0R1W7 72 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 HSPB6O14558 160 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
SEC13-201ENST00000337354 CHATP28329 748 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 CR1LQ2VPA4 569 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 SLC35E4Q6ICL7 350 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 AP3S1Q92572 193 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 CORO2AQ92828 525 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 ISOC1Q96CN7 298 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 PLEKHJ1Q9NW61 149 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 OR6C3Q9NZP0 311 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 ZNF581Q9P0T4 197 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 LINC00312Q9Y6C7 94 aa12.68□□□□□ -0.38
SEC13-201ENST00000337354 NSD1Q96L73 2696 aaPredicted RBP12.67□□□□□ -0.38
SEC13-201ENST00000337354 HIVEP2P31629 2446 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 TRGV10A0A0A0MS01 117 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 SMIM31A0A1B0GVY4 71 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
SEC13-201ENST00000337354 SOCS1O15524 211 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 PAHP00439 452 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 ZNF182P17025 639 aaPredicted RBP12.67□□□□□ -0.38
SEC13-201ENST00000337354 HNF1AP20823 631 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 SOX6P35712 828 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 VEGFCP49767 419 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 EFNB2P52799 333 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 ARF6P62330 175 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
SEC13-201ENST00000337354 ARL6IP1Q15041 203 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 Q6ZTK2 550 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 NDNFQ8TB73 568 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 CMTM3Q96MX0 182 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 WDFY2Q96P53 400 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 ETAA1Q9NY74 926 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 TAS2R3Q9NYW6 316 aa12.67□□□□□ -0.38
SEC13-201ENST00000337354 UBE2J1Q9Y385 318 aaPredicted RBP12.67□□□□□ -0.38
SEC13-201ENST00000337354 ABCA2Q9BZC7 2435 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 ODAMA1E959 279 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 POM121CA8CG34 1229 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 H3BMQ9 156 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 RAB27BO00194 218 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 TOX4O94842 621 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 GZMHP20718 246 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 GLIPR1P48060 266 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 TMEM50BP56557 158 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 SPCS2Q15005 226 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 NKAPLQ5M9Q1 402 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 RSBN1Q5VWQ0 802 aaPredicted RBP12.66□□□□□ -0.38
SEC13-201ENST00000337354 BRICD5Q6PL45 260 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 METAP1DQ6UB28 335 aaPredicted RBP12.66□□□□□ -0.38
SEC13-201ENST00000337354 GAPTQ8N292 157 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 TPRX1Q8N7U7 411 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 OR10R2Q8NGX6 335 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 LGALS14Q8TCE9 139 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 PHF21AQ96BD5 680 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 RAB3CQ96E17 227 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 COQ2Q96H96 371 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
SEC13-201ENST00000337354 RIMS4Q9H426 269 aaPredicted RBP12.66□□□□□ -0.38
SEC13-201ENST00000337354 RHBDL2Q9NX52 303 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 RSL24D1Q9UHA3 163 aaKnown RBP12.66□□□□□ -0.38
SEC13-201ENST00000337354 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
SEC13-201ENST00000337354 MALRD1Q5VYJ5 2156 aa12.65□□□□□ -0.38
SEC13-201ENST00000337354 MEIKINA0A087WXM9 373 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms