RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 MTCH1Q9NZJ7 389 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 ANKRD30BLA7E2S9 258 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 H0Y980 276 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 NUPL2O15504 423 aaKnown RBP9.2□□□□□ -0.94
CCDC172-201ENST00000333254 PITX3O75364 302 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 SCGB1D2O95969 90 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 SP9P0CG40 484 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 VDAC1P21796 283 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 ITGA3P26006 1051 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 APLNRP35414 380 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 MEOX1P50221 254 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 GPM6AP51674 278 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 AKR1C2P52895 323 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 PRSS12P56730 875 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 PLGLB1Q02325 96 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 AKR1C1Q04828 323 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 BAXQ07812 192 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 ZNF266Q14584 549 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 OR8G1Q15617 311 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 IGSF11Q5DX21 431 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 NMSQ5H8A3 153 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 SELENOHQ8IZQ5 122 aaKnown RBP9.2□□□□□ -0.94
CCDC172-201ENST00000333254 OR2C3Q8N628 320 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 BOLLQ8N9W6 283 aaKnown RBP9.2□□□□□ -0.94
CCDC172-201ENST00000333254 OR52M1Q8NGK5 317 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 OR5D13Q8NGL4 314 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 OR1K1Q8NGR3 316 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 BCL2L2Q92843 193 aaPredicted RBP9.2□□□□□ -0.94
CCDC172-201ENST00000333254 KIRREL1Q96J84 757 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
CCDC172-201ENST00000333254 SLC25A31Q9H0C2 315 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 PRELID1Q9Y255 219 aa9.2□□□□□ -0.94
CCDC172-201ENST00000333254 ESPL1Q14674 2120 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 WDR87Q6ZQQ6 2873 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 ZNF503-AS2A6NEH8 195 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SLC22A20A6NK97 555 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 UMAD1C9J7I0 102 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 DEGS1O15121 323 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SIGLEC5O15389 551 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 TSPAN9O75954 239 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SLC34A2O95436 690 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 IGHV3-9P01782 118 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SFTA3P0C7M3 94 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 CD46P15529 392 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 S100GP29377 79 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SNCAP37840 140 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 NKX2-1P43699 371 aaPredicted RBP9.19□□□□□ -0.94
CCDC172-201ENST00000333254 EWSR1Q01844 656 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SRYQ05066 204 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 CLN3Q13286 438 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 HERPUD1Q15011 391 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 PEA15Q15121 130 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 BRICD5Q6PL45 260 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 NUFIP2Q7Z417 695 aaKnown RBP9.19□□□□□ -0.94
CCDC172-201ENST00000333254 TBC1D26Q86UD7 250 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 Q8IYB0 196 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 CMTM1Q8IZ96 169 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 GAPTQ8N292 157 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
CCDC172-201ENST00000333254 SCRT1Q9BWW7 348 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 HES7Q9BYE0 225 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 PLEKHF2Q9H8W4 249 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 WFDC1Q9HC57 220 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 LYRM2Q9NU23 88 aaPredicted RBP9.19□□□□□ -0.94
CCDC172-201ENST00000333254 CACFD1Q9UGQ2 172 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 UBE2J1Q9Y385 318 aaPredicted RBP9.19□□□□□ -0.94
CCDC172-201ENST00000333254 DNAJC13O75165 2243 aa9.19□□□□□ -0.94
CCDC172-201ENST00000333254 MED13Q9UHV7 2174 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 A0A096LPE4 126 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 A0A1W2PPZ6 126 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 BTBD17A6NE02 478 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 FAM166BA8MTA8 275 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 J3QT63 122 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 TSPAN15O95858 294 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 ACAA1P09110 424 aaPredicted RBP9.18□□□□□ -0.94
CCDC172-201ENST00000333254 FOLR2P14207 255 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 RFC3P40938 356 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 NPBWR1P48145 328 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
CCDC172-201ENST00000333254 HLA-DRB3P79483 266 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 ID3Q02535 119 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 SLC10A1Q14973 349 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 FAM76BQ5HYJ3 339 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 FBXW9Q5XUX1 488 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 PCSK4Q6UW60 755 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 ZNF695Q8IW36 515 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 FAM58AQ8N1B3 248 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 DEFB123Q8N688 67 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 OR10Z1Q8NGY1 313 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 ZNF552Q9H707 407 aaPredicted RBP9.18□□□□□ -0.94
CCDC172-201ENST00000333254 GLRX2Q9NS18 164 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 ZNF407Q9C0G0 2248 aa9.18□□□□□ -0.94
CCDC172-201ENST00000333254 IGKV1-6A0A0C4DH72 117 aa9.17□□□□□ -0.94
CCDC172-201ENST00000333254 NKX2-6A6NCS4 301 aa9.17□□□□□ -0.94
CCDC172-201ENST00000333254 K7N7A8 449 aa9.17□□□□□ -0.94
CCDC172-201ENST00000333254 CDX4O14627 284 aaPredicted RBP9.17□□□□□ -0.94
CCDC172-201ENST00000333254 IL18BPO95998 194 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms