RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PCDHB16Q9NRJ7 776 aa22.4■■□□□ 1.18
ATPAF1-201ENST00000329231 FOXJ3Q9UPW0 622 aa22.4■■□□□ 1.18
ATPAF1-201ENST00000329231 TRAV8-7A0A075B6U6 113 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 PAX6P26367 422 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 PIGYQ3MUY2 71 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 OR52W1Q6IF63 320 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 CLEC7AQ9BXN2 247 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 ING3Q9NXR8 418 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 OR6C3Q9NZP0 311 aa22.39■■□□□ 1.17
ATPAF1-201ENST00000329231 IGHV2-26A0A0B4J1V2 119 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 TRAV24A0A0B4J272 114 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 A0A1W2PPK0 400 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 HSPB6O14558 160 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 ZNF780AO75290 641 aaPredicted RBP22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 MAPK3P27361 379 aaPredicted RBP22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 NHLRC3Q5JS37 347 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 HEPN1Q6WQI6 88 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 Q6ZSV7 163 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 OSR2Q8N2R0 312 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 LINC01006Q8NI28 216 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 WFDC12Q8WWY7 111 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 DERL3Q96Q80 235 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 ST3GAL6Q9Y274 331 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 RNF114Q9Y508 228 aa22.38■■□□□ 1.17
ATPAF1-201ENST00000329231 VGLL3A8MV65 326 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 RRP9O43818 475 aaKnown RBP22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 MMP23AO75900 390 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 KCNJ3P48549 501 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 LY6EQ16553 131 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 MINOS1Q5TGZ0 78 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 PRAMEF5Q5TYX0 476 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 BARHL1Q9BZE3 327 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 C16orf95Q9H693 158 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 RAB18Q9NP72 206 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 MINOS1-NBL1R4GNA1 71 aa22.37■■□□□ 1.17
ATPAF1-201ENST00000329231 MAGEA13PA6NCF6 341 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 TSPAN9O75954 239 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 SERPINA2P20848 420 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 CDK2P24941 298 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 RBM11P57052 281 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 GPR50Q13585 617 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 GPR176Q14439 515 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 SSX2Q16385 188 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 LINC00596Q86U02 117 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 CDH26Q8IXH8 852 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 OR4D6Q8NGJ1 314 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 PPIL3Q9H2H8 161 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 NCOR1P1Q9H4R4 102 aa22.36■■□□□ 1.17
ATPAF1-201ENST00000329231 ZNF729A6NN14 1252 aaPredicted RBP22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 GABARAPL2P60520 117 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 FAM189A2Q15884 450 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 SLC22A6Q4U2R8 563 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 LIAT1Q6ZQX7 453 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 RTN4RL2Q86UN3 420 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 DYNAPQ8N1N2 210 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 ABHD12Q8N2K0 398 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 JAGN1Q8N5M9 183 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 MS4A15Q8N5U1 240 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 ZNF565Q8N9K5 539 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 IFT22Q9H7X7 185 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 ISYNA1Q9NPH2 558 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 ABCB10Q9NRK6 738 aa22.35■■□□□ 1.17
ATPAF1-201ENST00000329231 OR7C1O76099 320 aaPredicted RBP22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 MAS1P04201 325 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 GTF2F2P13984 249 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 PAX5Q02548 391 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 PLA1AQ53H76 456 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 LDLRAD2Q5SZI1 272 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 NDNFQ8TB73 568 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 PIFOQ8TCI5 191 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 KIF25Q9UIL4 384 aa22.34■■□□□ 1.17
ATPAF1-201ENST00000329231 MEIKINA0A087WXM9 373 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 PIN1P1O15428 100 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 MAP2K4P45985 399 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 NKAIN3Q8N8D7 197 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 SUMF2Q8NBJ7 301 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 ZNF596Q8TC21 504 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 UFD1Q92890 307 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 MUL1Q969V5 352 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 DPCDQ9BVM2 203 aaPredicted RBP22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 ZNF696Q9H7X3 374 aa22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 MRPS28Q9Y2Q9 187 aaKnown RBP22.33■■□□□ 1.17
ATPAF1-201ENST00000329231 KBTBD11-OT1A0A1B0GTJ5 212 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 HSMCR30P0CW71 290 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 HTR1DP28221 377 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 GLP1RP43220 463 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 TBCEQ15813 527 aaPredicted RBP22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 MPV17LQ2QL34 196 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 KIAA2026Q5HYC2 2103 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 PRR31Q5SQ13 230 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 SLC35E4Q6ICL7 350 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 YTHDF1Q9BYJ9 559 aaKnown RBP22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 HILPDAQ9Y5L2 63 aa22.32■■□□□ 1.16
ATPAF1-201ENST00000329231 GEMIN2O14893 280 aaKnown RBP22.31■■□□□ 1.16
ATPAF1-201ENST00000329231 MRPS14O60783 128 aaKnown RBP22.31■■□□□ 1.16
ATPAF1-201ENST00000329231 CD34P28906 385 aa22.31■■□□□ 1.16
ATPAF1-201ENST00000329231 DYNLT3P51808 116 aa22.31■■□□□ 1.16
ATPAF1-201ENST00000329231 PROK1P58294 105 aa22.31■■□□□ 1.16
ATPAF1-201ENST00000329231 MLLT11Q13015 90 aaPredicted RBP22.31■■□□□ 1.16
ATPAF1-201ENST00000329231 TPBGQ13641 420 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms