RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 FAM219AQ8IW50 185 aa12.89□□□□□ -0.35
NUP98-201ENST00000324932 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
NUP98-201ENST00000324932 FOXQ1Q9C009 403 aa12.89□□□□□ -0.35
NUP98-201ENST00000324932 CA11O75493 328 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TNFSF15O95150 251 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 CYB5R3P00387 301 aaPredicted RBP12.88□□□□□ -0.35
NUP98-201ENST00000324932 HFEQ30201 348 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 C10orf113Q5VZT2 155 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 GABRG3Q99928 467 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 RSG1Q9BU20 258 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 LRRC61Q9BV99 259 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 CCL28Q9NRJ3 127 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 PLP1P60201 277 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TNFAIP6P98066 277 aaPredicted RBP12.88□□□□□ -0.35
NUP98-201ENST00000324932 FZD5Q13467 585 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 NKX2-6A6NCS4 301 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TCTAP57738 103 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 SKP2Q13309 424 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 GABRA6Q16445 453 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 C16orf82Q7Z2V1 217 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 ZFP64Q9NPA5 681 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TMEM140Q9NV12 185 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 PIPOXQ9P0Z9 390 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
NUP98-201ENST00000324932 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 SGMS2Q8NHU3 365 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TMEM38BQ9NVV0 291 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 FBLL1A6NHQ2 334 aaKnown RBP12.88□□□□□ -0.35
NUP98-201ENST00000324932 GNG7O60262 68 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 PITX3O75364 302 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 SERF2P84101 59 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 ASB10Q8WXI3 467 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
NUP98-201ENST00000324932 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 COX6CP09669 75 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 GZMHP20718 246 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 KLF3P57682 345 aaPredicted RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 TGIF2LYQ8IUE0 185 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 FLYWCH2Q96CP2 140 aaKnown RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 GAPDHP04406 335 aaKnown RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 SRD5A2P31213 254 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 LYZL2Q7Z4W2 148 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 TXNDC17Q9BRA2 123 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 AMER3Q8N944 861 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 OR10AC1Q8NH08 325 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 OR10D3Q8NH80 312 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 MPZL1O95297 269 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 GCSHP23434 173 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 PMELP40967 661 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 ZNF83P51522 516 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 AESQ08117 197 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 OR51M1Q9H341 326 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 CROCCQ5TZA2 2017 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 CTSVO60911 334 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 GPR61Q9BZJ8 451 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 KIR2DL1P43626 348 aaPredicted RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 KIR2DL2P43627 348 aaPredicted RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 CLDN18P56856 261 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 MESTQ5EB52 335 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 ZNF385CQ66K41 422 aaPredicted RBP12.87□□□□□ -0.35
NUP98-201ENST00000324932 OR2W1Q9Y3N9 320 aa12.87□□□□□ -0.35
NUP98-201ENST00000324932 COX7A1P24310 79 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 TRA2AQ13595 282 aaKnown RBP eCLIP12.86□□□□□ -0.35
NUP98-201ENST00000324932 SFTPA2Q8IWL1 248 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 RGP1Q92546 391 aaPredicted RBP12.86□□□□□ -0.35
NUP98-201ENST00000324932 FFAR1O14842 300 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 NMBP08949 121 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 COMPP49747 757 aaPredicted RBP12.86□□□□□ -0.35
NUP98-201ENST00000324932 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 CEBPDP49716 269 aaPredicted RBP12.86□□□□□ -0.35
NUP98-201ENST00000324932 Q8WTZ3 238 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 PTX4Q96A99 478 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 HSPB9Q9BQS6 159 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 NMUP48645 174 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 RBPMS2Q6ZRY4 209 aaKnown RBP12.86□□□□□ -0.35
NUP98-201ENST00000324932 ADAMTS17Q8TE56 1095 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 RAB37Q96AX2 223 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 UQCR10Q9UDW1 63 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 SRFP11831 508 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 CBLN3Q6UW01 205 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 MTURNQ8N3F0 131 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 SPEM1Q8N4L4 309 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 SF3B5Q9BWJ5 86 aaKnown RBP12.86□□□□□ -0.35
NUP98-201ENST00000324932 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
NUP98-201ENST00000324932 CD1BP29016 333 aa12.85□□□□□ -0.35
NUP98-201ENST00000324932 LGALS7P47929 136 aa12.85□□□□□ -0.35
NUP98-201ENST00000324932 ANKRD37Q7Z713 158 aa12.85□□□□□ -0.35
NUP98-201ENST00000324932 LDLRAD3Q86YD5 345 aa12.85□□□□□ -0.35
NUP98-201ENST00000324932 CARFQ8N187 725 aa12.85□□□□□ -0.35
NUP98-201ENST00000324932 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms