RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TMEM185AQ8NFB2 350 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 SETD6Q8TBK2 473 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 MTFP1Q9UDX5 166 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 FBXO9Q9UK97 447 aaPredicted RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 TBC1D24Q9ULP9 559 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 RBMX2Q9Y388 322 aaKnown RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 ANKRD17O75179 2603 aaKnown RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 TNFRSF13BO14836 293 aaPredicted RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 ADAM20O43506 726 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 GSTZ1O43708 216 aaPredicted RBP12.72□□□□□ -0.37
PRPF3-201ENST00000324862 GLIPR1P48060 266 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 CHODLQ9H9P2 273 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 GLS2Q9UI32 602 aa12.72□□□□□ -0.37
PRPF3-201ENST00000324862 IFNL4K9M1U5 179 aa12.71□□□□□ -0.37
PRPF3-201ENST00000324862 PLA2G10O15496 165 aa12.71□□□□□ -0.37
PRPF3-201ENST00000324862 RBBP9O75884 186 aa12.71□□□□□ -0.37
PRPF3-201ENST00000324862 SEC61A1P61619 476 aaKnown RBP12.71□□□□□ -0.37
PRPF3-201ENST00000324862 MRPL30Q8TCC3 161 aaKnown RBP12.71□□□□□ -0.37
PRPF3-201ENST00000324862 SPACA1Q9HBV2 294 aa12.71□□□□□ -0.37
PRPF3-201ENST00000324862 CHMP1AQ9HD42 196 aaPredicted RBP12.71□□□□□ -0.37
PRPF3-201ENST00000324862 TK1P04183 234 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 FCGR3AP08637 254 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 SDSLQ96GA7 329 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 BPESC1Q9GZL8 116 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 ZNF665Q9H7R5 613 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 KIF25Q9UIL4 384 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 MED13LQ71F56 2210 aa12.71□□□□□ -0.38
PRPF3-201ENST00000324862 CEACAM18A8MTB9 384 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 K7N7A8 449 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 CD3DP04234 171 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 EDDM3BP56851 147 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 RSBN1Q5VWQ0 802 aaPredicted RBP12.7□□□□□ -0.38
PRPF3-201ENST00000324862 C12orf4Q9NQ89 552 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 M0QYG6 137 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 NAPSAO96009 420 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 CSN2P05814 226 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 RFX2P48378 723 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 MRPS11P82912 194 aaKnown RBP12.7□□□□□ -0.38
PRPF3-201ENST00000324862 KLF9Q13886 244 aaPredicted RBP12.7□□□□□ -0.38
PRPF3-201ENST00000324862 ZNF497Q6ZNH5 498 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 GLCCI1Q86VQ1 547 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 TOMM5Q8N4H5 51 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 SCPEP1Q9HB40 452 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
PRPF3-201ENST00000324862 MT-ND4P03905 459 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 MDH2P40926 338 aaKnown RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 IL13RA1P78552 427 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 MRPS10P82664 201 aaKnown RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 MRPS15P82914 257 aaKnown RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 RBM39Q14498 530 aaKnown RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 KRBOX4Q5JUW0 171 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 PEG10Q86TG7 708 aaKnown RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 PRR18Q8N4B5 295 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 C15orf40Q8WUR7 153 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 POM121Q96HA1 1249 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 C11orf54Q9H0W9 315 aaPredicted RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 AKAP9Q99996 3911 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 PDZD2O15018 2839 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 TPPPO94811 219 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 NDUFB7P17568 137 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 GPR6P46095 362 aaPredicted RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 INPP1P49441 399 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 ATPAF1Q5TC12 328 aaPredicted RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 FAM53AQ6NSI3 398 aaPredicted RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 BEST4Q8NFU0 473 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 SNX22Q96L94 193 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 OCSTAMPQ9BR26 566 aa12.69□□□□□ -0.38
PRPF3-201ENST00000324862 TINAGL1Q9GZM7 467 aaPredicted RBP12.69□□□□□ -0.38
PRPF3-201ENST00000324862 MEIKINA0A087WXM9 373 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 ANKRD20A5PA0PJZ0 165 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 SULT1C2O00338 296 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 DVL1O14640 695 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 PMP2P02689 132 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 TMEM33P57088 247 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 OR13A1Q8NGR1 328 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 MRGPRDQ8TDS7 321 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 SLC25A10Q9UBX3 287 aaPredicted RBP12.68□□□□□ -0.38
PRPF3-201ENST00000324862 CELSR1Q9NYQ6 3014 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 SDCBPO00560 298 aaPredicted RBP12.68□□□□□ -0.38
PRPF3-201ENST00000324862 SCTP09683 121 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 GSTT2P0CG29 244 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 GSTT2BP0CG30 244 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 HRH1P35367 487 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 ARL6IP1Q15041 203 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 HOGA1Q86XE5 327 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 POC5Q8NA72 575 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 ZFAND2BQ8WV99 257 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 RAB1CQ92928 201 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 MYOZ1Q9NP98 299 aaPredicted RBP12.68□□□□□ -0.38
PRPF3-201ENST00000324862 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
PRPF3-201ENST00000324862 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
PRPF3-201ENST00000324862 NKX6-3A6NJ46 265 aa12.67□□□□□ -0.38
PRPF3-201ENST00000324862 RPS2P15880 293 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms