RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FOXB2Q5VYV0 432 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 OR52W1Q6IF63 320 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 PARP16Q8N5Y8 322 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 CHST4Q8NCG5 386 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 OR4D6Q8NGJ1 314 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 OR51T1Q8NGJ9 327 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 OR13C5Q8NGS8 318 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 OR56B4Q8NH76 319 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 OR5AK2Q8NH90 309 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 TNFAIP8L1Q8WVP5 186 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 TOMM40LQ969M1 308 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 ORAI1Q96D31 301 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 RBM14Q96PK6 669 aaKnown RBP9.83□□□□□ -0.84
TPM3-204ENST00000323144 SLC29A1Q99808 456 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 JAM3Q9BX67 310 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 NECAP2Q9NVZ3 263 aa9.83□□□□□ -0.84
TPM3-204ENST00000323144 MEIKINA0A087WXM9 373 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 FUOMA2VDF0 154 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 MAGEA13PA6NCF6 341 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 LEUTXA8MZ59 168 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 DEGS1O15121 323 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 IL1AP01583 271 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 SNRNP70P08621 437 aaKnown RBP9.82□□□□□ -0.84
TPM3-204ENST00000323144 CCDC159P0C7I6 412 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 LIMS3P0CW19 117 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 LIMS4P0CW20 117 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 CD33P20138 364 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 BRS3P32247 399 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 C9orf152Q5JTZ5 239 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 ZNF529Q6P280 563 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 ZFP1Q6P2D0 407 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 ETV3LQ6ZN32 361 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 REC114Q7Z4M0 266 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 DTX3Q8N9I9 347 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 UBALD1Q8TB05 177 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 MRGPRDQ8TDS7 321 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 CAPSLQ8WWF8 208 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 SGCDQ92629 289 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 CYYR1Q96J86 154 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 MOB4Q9Y3A3 225 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 HSPE1-MOB4S4R3N1 261 aa9.82□□□□□ -0.84
TPM3-204ENST00000323144 COL7A1Q02388 2944 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 KBTBD11-OT1A0A1B0GTJ5 212 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 A0A1W2PPE3 182 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 TOR1AO14656 332 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 WBP4O75554 376 aaKnown RBP9.81□□□□□ -0.84
TPM3-204ENST00000323144 CDRT1O95170 752 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 PF4P02776 101 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 CGB3P0DN86 165 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 CGB7P0DN87 165 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 RAB3AP20336 220 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 CEACAM3P40198 252 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 EMX1Q04741 257 aaPredicted RBP9.81□□□□□ -0.84
TPM3-204ENST00000323144 RAB40BQ12829 278 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 IL13RA2Q14627 380 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 OR2G6Q5TZ20 316 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 ELP2Q6IA86 826 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 FAM53AQ6NSI3 398 aaPredicted RBP9.81□□□□□ -0.84
TPM3-204ENST00000323144 SATL1Q86VE3 508 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 SERPINA12Q8IW75 414 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 RHOXF1Q8NHV9 184 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 CNIH3Q8TBE1 160 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 RPEQ96AT9 228 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 MRPL48Q96GC5 212 aaKnown RBP9.81□□□□□ -0.84
TPM3-204ENST00000323144 AKR1E2Q96JD6 320 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 GPER1Q99527 375 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 C9orf16Q9BUW7 83 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 RHOFQ9HBH0 211 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 INPP5EQ9NRR6 644 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 IDI2-AS1Q9NZ38 188 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 OR6C3Q9NZP0 311 aa9.81□□□□□ -0.84
TPM3-204ENST00000323144 SIRT4Q9Y6E7 314 aaPredicted RBP9.81□□□□□ -0.84
TPM3-204ENST00000323144 A0A1W2PP11 408 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 TCRBV4S1A1TA0A5B7 111 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 SNTNA6NMZ2 147 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 FADS2O95864 444 aaKnown RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 LALBAP00709 142 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 ETV1P50549 477 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 ARHGDIBP52566 201 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 GBX2P52951 348 aaPredicted RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 RBM11P57052 281 aaKnown RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 DDI2Q5TDH0 399 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 C18orf65Q6ZTR6 163 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 PQLC1Q8N2U9 271 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 DRAM1Q8N682 238 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 C5orf56Q8N8D9 126 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 PXT1Q8NFP0 134 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 OR4X2Q8NGF9 303 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 OR5D14Q8NGL3 314 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 OR9G1Q8NH87 305 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 RFESDQ8TAC1 157 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 RBMXL1Q96E39 390 aaKnown RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 FAM118AQ9NWS6 357 aa9.8□□□□□ -0.84
TPM3-204ENST00000323144 AMMECR1Q9Y4X0 333 aaPredicted RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 TSSC4Q9Y5U2 329 aaPredicted RBP9.8□□□□□ -0.84
TPM3-204ENST00000323144 LOC100130705A0A1B0GUX0 176 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 J3QR06 171 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 K7EIL1 84 aa9.79□□□□□ -0.84
TPM3-204ENST00000323144 ALX3O95076 343 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms