RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MMP26Q9NRE1 261 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 SPTA1P02549 2419 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 NBASA2RRP1 2371 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 TRAV17A0A0B4J275 112 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 PTGER4P35408 488 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 PHLDA2Q53GA4 152 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 ASCL4Q6XD76 172 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 GMPPAQ96IJ6 420 aaPredicted RBP10.64□□□□□ -0.71
RNF4-201ENST00000314289 FZR1Q9UM11 496 aa10.64□□□□□ -0.71
RNF4-201ENST00000314289 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 KALRNO60229 2985 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 TEX13DA0A0J9YY54 714 aaPredicted RBP10.63□□□□□ -0.71
RNF4-201ENST00000314289 H0YIZ8 118 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 HS3ST1O14792 307 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 KLK10O43240 276 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 PDCD6O75340 191 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 SFT2D2O95562 160 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 S100A12P80511 92 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 PJVKQ0ZLH3 352 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 PEA15Q15121 130 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 OR10C1Q96KK4 312 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 HIST1H2AAQ96QV6 131 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 NRIP2Q9BQI9 281 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 SEC11CQ9BY50 192 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 CLCF1Q9UBD9 225 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 IGF2RP11717 2491 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 SPTBN4Q9H254 2564 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 TRAV20A0A0B4J274 112 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 FCGR2CP31995 323 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 UBE2NP61088 152 aaKnown RBP10.63□□□□□ -0.71
RNF4-201ENST00000314289 FAM214BQ7L5A3 538 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 RNF126Q9BV68 326 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 CYTL1Q9NRR1 136 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 OR5AC2Q9NZP5 309 aa10.63□□□□□ -0.71
RNF4-201ENST00000314289 DIDO1Q9BTC0 2240 aaKnown RBP10.63□□□□□ -0.71
RNF4-201ENST00000314289 SFTA3P0C7M3 94 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 MST1LQ2TV78 715 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 PEG10Q86TG7 708 aaKnown RBP10.62□□□□□ -0.71
RNF4-201ENST00000314289 ZGRF1Q86YA3 2104 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 OR11L1Q8NGX0 322 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 RDH5Q92781 318 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 EXTL1Q92935 676 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 C14orf79Q96F83 325 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 C14orf166Q9Y224 244 aaKnown RBP10.62□□□□□ -0.71
RNF4-201ENST00000314289 TLN1Q9Y490 2541 aaKnown RBP10.62□□□□□ -0.71
RNF4-201ENST00000314289 TRAV39A0A0B4J263 110 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 ANKRD30BLA7E2S9 258 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 FUT3P21217 361 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 KIR2DL2P43627 348 aaPredicted RBP10.62□□□□□ -0.71
RNF4-201ENST00000314289 ID4P47928 161 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 TAS2R31P59538 309 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 S100A10P60903 97 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 RAB5BP61020 215 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 FAM209BQ5JX69 171 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 C10orf91Q5T1B1 145 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 TMEM100Q9NV29 134 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
RNF4-201ENST00000314289 HSF4Q9ULV5 492 aa10.62□□□□□ -0.71
RNF4-201ENST00000314289 DBX1A6NMT0 343 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 TRAPPC2LH3BP13 241 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 LRP3O75074 770 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 MED6O75586 246 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 IGHG3P01860 377 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 IFNA4P05014 189 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 S100A6P06703 90 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 COX5BP10606 129 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 HOXB1P14653 301 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 RPS2P15880 293 aaKnown RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 HLA-GP17693 338 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 CD80P33681 288 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 PPT1P50897 306 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 SMCO1Q147U7 214 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 FAHD2BQ6P2I3 314 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 CXorf67Q86X51 503 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 FAHD2AQ96GK7 314 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 SS18L1O75177 396 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 FABP1P07148 127 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 RCC1P18754 421 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 F2RL1P55085 397 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 PIGPP57054 158 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 HABP2Q14520 560 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 ARL6IP1Q15041 203 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 UBALD1Q8TB05 177 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 PARP12Q9H0J9 701 aaKnown RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 OPN3Q9H1Y3 402 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 NECAP2Q9NVZ3 263 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 FBXO24O75426 580 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 CEACAM1P13688 526 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 ZNF14P17017 642 aaPredicted RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 TBC1D28Q2M2D7 210 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 OR5L1Q8NGL2 311 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 NANOS1Q8WY41 292 aaKnown RBP10.61□□□□□ -0.71
RNF4-201ENST00000314289 OR5P3Q8WZ94 311 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
RNF4-201ENST00000314289 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms