RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 FAM90A20PA6NIJ5 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A8PA6NJQ4 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A7PA6NKC0 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 C17orf98A8MV24 154 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A22PA8MWA6 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A12PA8MX19 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A5PA8MXJ8 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A23PA8MXZ1 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 MCRIP1C9JLW8 97 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A15PP0C7V4 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A13PP0C7W8 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A14PP0C7W9 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM90A24PP0C7X0 464 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 GALP22466 123 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FABP5Q01469 135 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 NEDD8Q15843 81 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 RAB11BQ15907 218 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 TAF9Q16594 264 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 MIDNQ504T8 468 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 LRRTM1Q86UE6 522 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 SUMF2Q8NBJ7 301 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 KCNG3Q8TAE7 436 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 FAM46BQ96A09 425 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 C19orf24Q9BVV8 132 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 TMEM59Q9BXS4 323 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 RAB9BQ9NP90 201 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 TAS2R3Q9NYW6 316 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 SESN1Q9Y6P5 492 aa16.24■□□□□ 0.19
VEGFB-201ENST00000309422 MEX3AA1L020 520 aaKnown RBP16.23■□□□□ 0.19
VEGFB-201ENST00000309422 BPNT1O95861 308 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 MPIG6BO95866 241 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 IGHV1-8P0DP01 117 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 SAA4P35542 130 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 UBA52P62987 128 aaKnown RBP16.23■□□□□ 0.19
VEGFB-201ENST00000309422 DYNC1I2Q13409 638 aaKnown RBP16.23■□□□□ 0.19
VEGFB-201ENST00000309422 TMEM91Q6ZNR0 172 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 TMEM86BQ8N661 226 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 FAM216AQ8WUB2 273 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 URM1Q9BTM9 101 aaKnown RBP16.23■□□□□ 0.19
VEGFB-201ENST00000309422 SSR3Q9UNL2 185 aa16.23■□□□□ 0.19
VEGFB-201ENST00000309422 A0A087WXM4 84 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 TRAV24A0A0B4J272 114 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 A0A0U1RQK1 487 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 MDFIC2A0A1B0GVS7 189 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 TRDV1A0A1B0GX56 115 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 ZNF729A6NN14 1252 aaPredicted RBP16.22■□□□□ 0.19
VEGFB-201ENST00000309422 CLDN34H7C241 214 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 ARG1P05089 322 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 ARSBP15848 533 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 GLIPR1P48060 266 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 SRSF2Q01130 221 aaKnown RBP16.22■□□□□ 0.19
VEGFB-201ENST00000309422 PRB3Q04118 309 aaPredicted RBP16.22■□□□□ 0.19
VEGFB-201ENST00000309422 SSX1Q16384 188 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 KRTAP24-1Q3LI83 254 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 PNKDQ8N490 385 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 ZNF48Q96MX3 618 aaPredicted RBP16.22■□□□□ 0.19
VEGFB-201ENST00000309422 BANF2Q9H503 90 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 STUB1Q9UNE7 303 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 AK6Q9Y3D8 172 aaKnown RBP16.22■□□□□ 0.19
VEGFB-201ENST00000309422 POMT1Q9Y6A1 747 aa16.22■□□□□ 0.19
VEGFB-201ENST00000309422 A0A1W2PP11 408 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 HOXA3O43365 443 aaPredicted RBP16.21■□□□□ 0.19
VEGFB-201ENST00000309422 CRYBA1P05813 215 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 FAM189A2Q15884 450 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 TIMM50Q3ZCQ8 353 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 C1orf100Q5SVJ3 147 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 RAB12Q6IQ22 244 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 TNFRSF14Q92956 283 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 DUX5Q96PT3 197 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 NEDD4LQ96PU5 975 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 KIF25Q9UIL4 384 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 V9GY05 133 aa16.21■□□□□ 0.19
VEGFB-201ENST00000309422 SLC17A2O00624 439 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 SLC22A1O15245 554 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 RNASE1P07998 156 aaKnown RBP16.2■□□□□ 0.18
VEGFB-201ENST00000309422 CDK2P24941 298 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 ARHGDIBP52566 201 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 DLX1P56177 255 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 NKAPLQ5M9Q1 402 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 Q6YL49 198 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 ZDHHC22Q8N966 263 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 TSPAN14Q8NG11 270 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 CORO2AQ92828 525 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 GCDHQ92947 438 aaPredicted RBP16.2■□□□□ 0.18
VEGFB-201ENST00000309422 COQ2Q96H96 371 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 CLEC7AQ9BXN2 247 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 PPIL3Q9H2H8 161 aaKnown RBP16.2■□□□□ 0.18
VEGFB-201ENST00000309422 NCOR1P1Q9H4R4 102 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 ETAA1Q9NY74 926 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 TBL2Q9Y4P3 447 aaKnown RBP16.2■□□□□ 0.18
VEGFB-201ENST00000309422 PEX16Q9Y5Y5 336 aa16.2■□□□□ 0.18
VEGFB-201ENST00000309422 CUBNO60494 3623 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 TRAV1-2A0A0B4J238 106 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 AIPO00170 330 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 TOR1AO14656 332 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 CA11O75493 328 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 MELTFP08582 738 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 DLX6P56179 175 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 PAX5Q02548 391 aa16.19■□□□□ 0.18
VEGFB-201ENST00000309422 PRAMEF5Q5TYX0 476 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms