RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 SULF2Q8IWU5 870 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 FAM71E2Q8N5Q1 922 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 ZIC4Q8N9L1 334 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 ZNF799Q96GE5 643 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 Q96M66 194 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 PACRGQ96M98 296 aaPredicted RBP13.98□□□□□ -0.17
LONRF3-201ENST00000304778 PLEKHJ1Q9NW61 149 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 KNTC1P50748 2209 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 EREGO14944 169 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 CYTIPO60759 359 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 CHATP28329 748 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 FAM3AP98173 230 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 ELOBQ15370 118 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 SGPP2Q8IWX5 399 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 TMEM123Q8N131 208 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 FNDC9Q8TBE3 224 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 TMED3Q9Y3Q3 217 aa13.98□□□□□ -0.17
LONRF3-201ENST00000304778 LSM5Q9Y4Y9 91 aaKnown RBP13.98□□□□□ -0.17
LONRF3-201ENST00000304778 ELOA3CA0A087WX78 387 aaPredicted RBP13.97□□□□□ -0.17
LONRF3-201ENST00000304778 TGIF2-C20orf24A0A0A6YYL0 155 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 PINLYPA6NC86 204 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 GJE1A6NN92 205 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 TRAPPC6AO75865 159 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 PTBP3O95758 552 aaKnown RBP13.97□□□□□ -0.17
LONRF3-201ENST00000304778 CTSDP07339 412 aaPredicted RBP13.97□□□□□ -0.17
LONRF3-201ENST00000304778 DBHP09172 617 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 AKR1C8PQ5T2L2 129 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 DHRS13Q6UX07 377 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 CYB5BO43169 146 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 DHHO43323 396 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 UCP2P55851 309 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 ERVFRD-1P60508 538 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 TNFRSF9Q07011 255 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 WIPI1Q5MNZ9 446 aaPredicted RBP13.97□□□□□ -0.17
LONRF3-201ENST00000304778 TMEM164Q5U3C3 297 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 HDHD3Q9BSH5 251 aaPredicted RBP13.97□□□□□ -0.17
LONRF3-201ENST00000304778 DECR2Q9NUI1 292 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 PLEK2Q9NYT0 353 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 TUBD1Q9UJT1 453 aa13.97□□□□□ -0.17
LONRF3-201ENST00000304778 NCKAP5O14513 1909 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 CCDC187A0A096LP49 1063 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 CRYM-AS1A6NIL9 109 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 DEDDO75618 318 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 PRH1P02810 166 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 GAPDHP04406 335 aaKnown RBP13.96□□□□□ -0.17
LONRF3-201ENST00000304778 SPINK14Q6IE38 97 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 SUMF2Q8NBJ7 301 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 NDUFAF3Q9BU61 184 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 RBM24Q9BX46 236 aaKnown RBP13.96□□□□□ -0.17
LONRF3-201ENST00000304778 CBY1Q9Y3M2 126 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 SMCO3A2RU48 225 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 MSTNO14793 375 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 MBP02144 154 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 DANCRP0C864 163 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 TAGLN2P37802 199 aaKnown RBP13.96□□□□□ -0.17
LONRF3-201ENST00000304778 CEBPGP53567 150 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 RAC3P60763 192 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 SNAI3Q3KNW1 292 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 GGNQ86UU5 652 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 RARRES2Q99969 163 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 METTL9Q9H1A3 318 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 C19orf12Q9NSK7 152 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 FAM86C1Q9NVL1 165 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 ANXA10Q9UJ72 324 aa13.96□□□□□ -0.17
LONRF3-201ENST00000304778 KIAA1549Q9HCM3 1950 aa13.96□□□□□ -0.18
LONRF3-201ENST00000304778 CEACAM6P40199 344 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 SUCLG1P53597 346 aaKnown RBP13.95□□□□□ -0.18
LONRF3-201ENST00000304778 CARD18P57730 90 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 GGNBP1Q5YKI7 109 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 PLXDC2Q6UX71 529 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 KCNE4Q8WWG9 221 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 SPTSSAQ969W0 71 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 SH3BGRL3Q9H299 93 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 RYDENQ9NUL5 291 aaKnown RBP13.95□□□□□ -0.18
LONRF3-201ENST00000304778 FOXD3Q9UJU5 478 aaPredicted RBP13.95□□□□□ -0.18
LONRF3-201ENST00000304778 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
LONRF3-201ENST00000304778 TRGC1P0CF51 173 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 C4orf17Q53FE4 359 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 C5orf24Q7Z6I8 188 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 ZNF664Q8N3J9 261 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 RAB39BQ96DA2 213 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 PBDC1Q9BVG4 233 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 GPR173Q9NS66 373 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 XRCC2O43543 280 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 IFNA21P01568 189 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 TMEM225BP0DP42 221 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 GDF1P27539 372 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 PPP1CCP36873 323 aaKnown RBP13.95□□□□□ -0.18
LONRF3-201ENST00000304778 SP6Q3SY56 376 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 NAXEQ8NCW5 288 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 OR5R1Q8NH85 324 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 RAB24Q969Q5 203 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 SPSB1Q96BD6 273 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 ZNF837Q96EG3 531 aaPredicted RBP13.95□□□□□ -0.18
LONRF3-201ENST00000304778 PRRX2Q99811 253 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 GPR87Q9BY21 358 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 ULBP2Q9BZM5 246 aa13.95□□□□□ -0.18
LONRF3-201ENST00000304778 SOX15O60248 233 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms