RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 RELQ04864 619 aaPredicted RBP11.27□□□□□ -0.61
TVP23A-201ENST00000299866 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 ATP5SQ99766 215 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 SPIN2AQ99865 258 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 SPIN2BQ9BPZ2 258 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 PCGF1Q9BSM1 259 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF442Q9H7R0 627 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
TVP23A-201ENST00000299866 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF41P51814 821 aaPredicted RBP11.26□□□□□ -0.61
TVP23A-201ENST00000299866 CLDN17P56750 224 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 RPS18P62269 152 aaKnown RBP11.26□□□□□ -0.61
TVP23A-201ENST00000299866 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
TVP23A-201ENST00000299866 GPR137CQ8N3F9 429 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 CISD1Q9NZ45 108 aaKnown RBP11.26□□□□□ -0.61
TVP23A-201ENST00000299866 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 V9GYS6 101 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 A6NNC1 897 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 TK1P04183 234 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 PLA2G5P39877 138 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
TVP23A-201ENST00000299866 SNAI3Q3KNW1 292 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 ELOVL1Q9BW60 279 aa11.26□□□□□ -0.61
TVP23A-201ENST00000299866 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 FBLP22087 321 aaKnown RBP11.25□□□□□ -0.61
TVP23A-201ENST00000299866 RTP5Q14D33 572 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
TVP23A-201ENST00000299866 ADGRG7Q96K78 797 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 SPTY2D1-AS1A0A0U1RR47 76 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 FOSL2P15408 326 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 ARL4DP49703 201 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 IZUMO4Q1ZYL8 232 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 H1FOOQ8IZA3 346 aaPredicted RBP11.25□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF441Q8N8Z8 693 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 OR5T1Q8NG75 326 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
TVP23A-201ENST00000299866 LRRC61Q9BV99 259 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 SLC7A10Q9NS82 523 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 P4HTMQ9NXG6 502 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 ST3GAL6Q9Y274 331 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 M0R135 149 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 FGF5P12034 268 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 GALR1P47211 349 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 NUBP1P53384 320 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
TVP23A-201ENST00000299866 OR5L2Q8NGL0 311 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 SCGB1C1Q8TD33 95 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 TMEM18Q96B42 140 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF799Q96GE5 643 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 OR5B12Q96R08 314 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 KIAA0100Q14667 2235 aaKnown RBP11.25□□□□□ -0.61
TVP23A-201ENST00000299866 PCDH15Q96QU1 1955 aa11.25□□□□□ -0.61
TVP23A-201ENST00000299866 SDK1Q7Z5N4 2213 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 TCRBV21S2A2A0A5A6 115 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 H3BMH7 237 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 HMGB3O15347 200 aaKnown RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 DLX2Q07687 328 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 ABLIM2Q6H8Q1 611 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 Q6ZPA2 131 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 SLC25A26Q70HW3 274 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 OR10G4Q8NGN3 311 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 RBM24Q9BX46 236 aaKnown RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 TPSD1Q9BZJ3 242 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 PRSS50Q9UI38 385 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 HS3ST3A1Q9Y663 406 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 H7BYZ3 331 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 GNB2P62879 340 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 HERPUD1Q15011 391 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 ZNF726P1Q15940 193 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 BTNL3Q6UXE8 466 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 GJC3Q8NFK1 279 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 CTDSP1Q9GZU7 261 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 RBKSQ9H477 322 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 Q9N2K0 584 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 WNT16Q9UBV4 365 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 C2orf16Q68DN1 1984 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 IGKV1-12A0A0C4DH73 117 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 A0A0U1RQV5 110 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 OR7C1O76099 320 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-201ENST00000299866 IGKV1D-12P01611 117 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 CEACAM1P13688 526 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 TDGF1P3P51864 188 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 UCP3P55916 312 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 SRPXP78539 464 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 TESK1Q15569 626 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 IQCJQ1A5X6 159 aa11.24□□□□□ -0.61
TVP23A-201ENST00000299866 GAPTQ8N292 157 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms