RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 CLDN16Q9Y5I7 305 aa13.33□□□□□ -0.28
USP25-201ENST00000285679 TRIOO75962 3097 aa13.33□□□□□ -0.28
USP25-201ENST00000285679 WNK2Q9Y3S1 2297 aa13.33□□□□□ -0.28
USP25-201ENST00000285679 A0A1W2PPC4 97 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PRR19A6NJB7 356 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PTBP3O95758 552 aaKnown RBP13.32□□□□□ -0.28
USP25-201ENST00000285679 MSX1P28360 303 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PKIAP61925 76 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 SNAI3Q3KNW1 292 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 HEPN1Q6WQI6 88 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 YRDCQ86U90 279 aaKnown RBP13.32□□□□□ -0.28
USP25-201ENST00000285679 GAPTQ8N292 157 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 FSCN3Q9NQT6 498 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 CFAP54Q96N23 3096 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PMS2P1A4D2B8 440 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 MPPED1O15442 326 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 DFFBO76075 338 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PAX6P26367 422 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 CARD18P57730 90 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 UBE2G2P60604 165 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 QRFPP83859 136 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 OR8G1Q15617 311 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 OR14J1Q9UGF5 321 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PKDREJQ9NTG1 2253 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 A0A1W2PQD3 144 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 IGSF23A1L1A6 192 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 SPINK4O60575 86 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 TUSC2O75896 110 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 HOXC4P09017 264 aaPredicted RBP13.32□□□□□ -0.28
USP25-201ENST00000285679 HLA-BQ31612 363 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 FIP1L1Q6UN15 594 aaKnown RBP13.32□□□□□ -0.28
USP25-201ENST00000285679 MAML2Q8IZL2 1156 aaPredicted RBP13.32□□□□□ -0.28
USP25-201ENST00000285679 EXTL1Q92935 676 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 MRGPRX4Q96LA9 322 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 RNF150Q9ULK6 438 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 PCNX1Q96RV3 2341 aa13.32□□□□□ -0.28
USP25-201ENST00000285679 SZT2Q5T011 3432 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 SERPINA7P05543 415 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 SNRPCP09234 159 aaKnown RBP13.31□□□□□ -0.28
USP25-201ENST00000285679 CHRNA7P36544 502 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 HLA-CQ95604 372 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 CCL28Q9NRJ3 127 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 PTPRSQ13332 1948 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 UBE2L5PA0A1B0GUS4 154 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 ZNF814B7Z6K7 855 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 TMEM187Q14656 261 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 OR13D1Q8NGV5 346 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
USP25-201ENST00000285679 SLC25A22Q9H936 323 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 KIAA1456Q9P272 454 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 RARRES3Q9UL19 164 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 HS3ST3B1Q9Y662 390 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 TNFSF11O14788 317 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 NPIPB7O75200 414 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 FUT3P21217 361 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 ANOS1P23352 680 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 OR10AD1Q8NGE0 317 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 CHST5Q9GZS9 411 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 FUT9Q9Y231 359 aa13.31□□□□□ -0.28
USP25-201ENST00000285679 SRPXP78539 464 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 ELOBQ15370 118 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 TMEM41BQ5BJD5 291 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 MRPL21Q7Z2W9 205 aaKnown RBP13.3□□□□□ -0.28
USP25-201ENST00000285679 PSMF1Q92530 271 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 NTNG2Q96CW9 530 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 PGA3P0DJD8 388 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 AAED1Q7RTV5 226 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 LHFPL1Q86WI0 220 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 MUCL1Q96DR8 90 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 HDGFL3Q9Y3E1 203 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 CACNA1BQ00975 2339 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 TRAPPC2LH3BP13 241 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 DVL1O14640 695 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 CLPSP04118 112 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 BAXQ07812 192 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 SHHQ15465 462 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 MKXQ8IYA7 352 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 C14orf144Q96I85 54 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 TAAR9Q96RI9 348 aa13.3□□□□□ -0.28
USP25-201ENST00000285679 ZNF808Q8N4W9 903 aaPredicted RBP13.29□□□□□ -0.28
USP25-201ENST00000285679 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 UCK1Q9HA47 277 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 SEBOXQ9HB31 216 aaPredicted RBP13.29□□□□□ -0.28
USP25-201ENST00000285679 CADP27708 2225 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 A0A1W2PNV4 684 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 SHISA7A6NL88 538 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 E9PLN8 166 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
USP25-201ENST00000285679 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 SRP19P09132 144 aaKnown RBP13.29□□□□□ -0.28
USP25-201ENST00000285679 HIST1H1BP16401 226 aaKnown RBP13.29□□□□□ -0.28
USP25-201ENST00000285679 ZNF32P17041 273 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 OTX2P32243 289 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 BOD1Q96IK1 185 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 IER2Q9BTL4 223 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 TUBA4BQ9H853 241 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 PSENENQ9NZ42 101 aa13.29□□□□□ -0.28
USP25-201ENST00000285679 C19orf25Q9UFG5 118 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms