RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TRBV5-3A0A0A0MS03 114 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
USP53-201ENST00000274030 ANKRD34CP0C6C1 535 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 RNF224P0DH78 156 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 REG1BP48304 166 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 DCAF10Q5QP82 559 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 ADAD2Q8NCV1 583 aaKnown RBP10.06□□□□□ -0.8
USP53-201ENST00000274030 OR2M3Q8NG83 312 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 ISOC2Q96AB3 205 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 SF3B5Q9BWJ5 86 aaKnown RBP10.06□□□□□ -0.8
USP53-201ENST00000274030 PRO1933Q9H354 126 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 SH2D2AQ9NP31 389 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 THYN1Q9P016 225 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 AMDHD2Q9Y303 409 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 UFC1Q9Y3C8 167 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 PPYP01298 95 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 SCGB1C2P0DMR2 95 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 AESQ08117 197 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 MPV17LQ2QL34 196 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 ADAT3Q96EY9 351 aaPredicted RBP10.06□□□□□ -0.8
USP53-201ENST00000274030 V9GYH0 126 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 IGHV4-34P06331 123 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 IL11P20809 199 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 RAG2P55895 527 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 MOGAT2Q3SYC2 334 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 KLHDC1Q8N7A1 406 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 TPRX1Q8N7U7 411 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 IL22RA2Q969J5 263 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 BGLAPP02818 100 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 CST2P09228 141 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 SCAND1P57086 179 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 LYZL2Q7Z4W2 148 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 FAM210BQ96KR6 192 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 DOCK1Q14185 1865 aa10.06□□□□□ -0.8
USP53-201ENST00000274030 GSTZ1O43708 216 aaPredicted RBP10.05□□□□□ -0.8
USP53-201ENST00000274030 IGKV1D-16P01601 117 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 TGIF2LYQ8IUE0 185 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 OOEPA6NGQ2 149 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 KCNAB3O43448 404 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 IGF2P01344 180 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 LIFP15018 202 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 SIGLEC14Q08ET2 396 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 PMS2P11Q13670 270 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 INPP5JQ15735 1006 aaPredicted RBP10.05□□□□□ -0.8
USP53-201ENST00000274030 OR4P4Q8NGL7 312 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 DPF1Q92782 380 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 RBM14Q96PK6 669 aaKnown RBP10.05□□□□□ -0.8
USP53-201ENST00000274030 AMMECR1Q9Y4X0 333 aaPredicted RBP10.05□□□□□ -0.8
USP53-201ENST00000274030 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 CD40P25942 277 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 DTD1Q8TEA8 209 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
USP53-201ENST00000274030 OR2J1Q9GZK6 312 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 RTTNQ86VV8 2226 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 KIR2DS2P43631 304 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 PSG5Q15238 335 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 OR10A7Q8NGE5 316 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 SLC2A9Q9NRM0 540 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 TMEM38BQ9NVV0 291 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 AURKAIP1Q9NWT8 199 aaPredicted RBP10.05□□□□□ -0.8
USP53-201ENST00000274030 CBY3A6NI87 242 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 MS4A18H0YCH9 400 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 F2RL2O00254 374 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 MS4A18Q3C1V0 323 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 MDP1Q86V88 176 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 RPS4Y2Q8TD47 263 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 KLHDC2Q9Y2U9 406 aa10.05□□□□□ -0.8
USP53-201ENST00000274030 CACNA1IQ9P0X4 2223 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 RBFOX3A6NFN3 312 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 GNG7O60262 68 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 UPK3AO75631 287 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 LGALS7P47929 136 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 RFLNBQ8N5W9 214 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 OR8B3Q8NGG8 313 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 ZNF721Q8TF20 911 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 ST6GAL2Q96JF0 529 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 OR8B2Q96RD0 313 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 RNF2Q99496 336 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 MRPS18BQ9Y676 258 aaKnown RBP10.04□□□□□ -0.8
USP53-201ENST00000274030 NKX2-6A6NCS4 301 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 ZNF716A6NP11 495 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 TMEM91Q6ZNR0 172 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 CRHP06850 196 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 HLA-GP17693 338 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 RPS4Y1P22090 263 aaKnown RBP10.04□□□□□ -0.8
USP53-201ENST00000274030 BMI1P35226 326 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 SPCS3P61009 180 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 SLC23A3Q6PIS1 610 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 PDPNQ86YL7 162 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 MS4A10Q96PG2 267 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 INSIG2Q9Y5U4 225 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 TRIP12Q14669 1992 aaPredicted RBP10.04□□□□□ -0.8
USP53-201ENST00000274030 C5orf67F2Z3F1 127 aa10.04□□□□□ -0.8
USP53-201ENST00000274030 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
USP53-201ENST00000274030 ACAA2P42765 397 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms