RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 HIKESHIQ53FT3 197 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 SELENOHQ8IZQ5 122 aaKnown RBP9.5□□□□□ -0.89
MSH3-201ENST00000265081 SUMF2Q8NBJ7 301 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 OR5L1Q8NGL2 311 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 ARL11Q969Q4 196 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 FBXL17Q9UF56 701 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 J3QT63 122 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 SEC11BP0C7V7 166 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 GLP1RP43220 463 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 ZNF818PQ6ZRF7 136 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 OR52M1Q8NGK5 317 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 OR5D13Q8NGL4 314 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 TMED6Q8WW62 240 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 SEC11CQ9BY50 192 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 WFDC1Q9HC57 220 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 TMA7Q9Y2S6 64 aaKnown RBP9.5□□□□□ -0.89
MSH3-201ENST00000265081 LRP5LA4QPB2 252 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 LRP3O75074 770 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 PITX3O75364 302 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 APLNRP35414 380 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 TMEM33P57088 247 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 PAX5Q02548 391 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 ZNF146Q15072 292 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 SPAG16Q8N0X2 631 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 SLC35G3Q8N808 338 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 WIPI2Q9Y4P8 454 aa9.5□□□□□ -0.89
MSH3-201ENST00000265081 H0Y980 276 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 TRAPPC2LH3BP13 241 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 OR7C1O76099 320 aaPredicted RBP9.49□□□□□ -0.89
MSH3-201ENST00000265081 IGHV1-2P23083 117 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 GABRA6Q16445 453 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 ATP1A1-AS1Q5TC04 95 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 ERGIC1Q969X5 290 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 MBNL3Q9NUK0 354 aaKnown RBP9.49□□□□□ -0.89
MSH3-201ENST00000265081 GPR31O00270 319 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 IGKV3-15P01624 115 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 SCTP09683 121 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 TUBG1P23258 451 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 LPAR6P43657 344 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
MSH3-201ENST00000265081 PLP2Q04941 152 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 CLN3Q13286 438 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 ABCA11PQ4W5N1 156 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 ZNF497Q6ZNH5 498 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 Q8IYB0 196 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 LRRC46Q96FV0 321 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 ZNF442Q9H7R0 627 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 TUBG2Q9NRH3 451 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 ASF1BQ9NVP2 202 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 IGKV1D-13A0A0B4J2D9 117 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 A0A1B0GW64 132 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 FAM221AA4D161 298 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 KIAA1324LA8MWY0 1029 aaPredicted RBP9.49□□□□□ -0.89
MSH3-201ENST00000265081 IGKV1-13P0DP09 117 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 EIF5AL1Q6IS14 154 aaKnown RBP9.49□□□□□ -0.89
MSH3-201ENST00000265081 FAM219AQ8IW50 185 aa9.49□□□□□ -0.89
MSH3-201ENST00000265081 FREM1Q5H8C1 2179 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 DEGS1O15121 323 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 DANCRP0C864 163 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 PGA5P0DJD9 388 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 RCC1P18754 421 aaPredicted RBP9.48□□□□□ -0.89
MSH3-201ENST00000265081 HLA-DRB3P79483 266 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 CCDC157Q569K6 752 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 Q6ZT83 130 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 MOB1BQ7L9L4 216 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 TBC1D26Q86UD7 250 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 NRIP2Q9BQI9 281 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 PARD6AQ9NPB6 346 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 ANKRD30BLA7E2S9 258 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 HEXAP06865 529 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 C9orf135Q5VTT2 229 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 FAM58AQ8N1B3 248 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 FAM169BQ8N8A8 192 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 TOMM40LQ969M1 308 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 BSCL2Q96G97 398 aaPredicted RBP9.48□□□□□ -0.89
MSH3-201ENST00000265081 NKX6-2Q9C056 277 aaPredicted RBP9.48□□□□□ -0.89
MSH3-201ENST00000265081 DLL3Q9NYJ7 618 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 TMEM210A6NLX4 147 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 RAC2P15153 192 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 S100A10P60903 97 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 ID3Q02535 119 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 BTN1A1Q13410 526 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 EIF4EBP1Q13541 118 aaPredicted RBP9.48□□□□□ -0.89
MSH3-201ENST00000265081 PDCD1Q15116 288 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 TBC1D28Q2M2D7 210 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 SP6Q3SY56 376 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 DHRS7BQ6IAN0 325 aaPredicted RBP9.48□□□□□ -0.89
MSH3-201ENST00000265081 INO80CQ6PI98 192 aaPredicted RBP9.48□□□□□ -0.89
MSH3-201ENST00000265081 MED13Q9UHV7 2174 aa9.48□□□□□ -0.89
MSH3-201ENST00000265081 SLC33A1O00400 549 aaPredicted RBP9.47□□□□□ -0.89
MSH3-201ENST00000265081 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 HERV-K104P61576 105 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 MSMO1Q15800 293 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 COMMD1Q8N668 190 aa9.47□□□□□ -0.89
MSH3-201ENST00000265081 KDF1Q8NAX2 398 aaPredicted RBP9.47□□□□□ -0.89
MSH3-201ENST00000265081 SEBOXQ9HB31 216 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms