RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 GDPD3Q7L5L3 318 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 LRRC28Q86X40 367 aaPredicted RBP10.86□□□□□ -0.67
TRAP1-201ENST00000246957 C1orf87Q8N0U7 546 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 CLDND2Q8NHS1 167 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 ANK3Q12955 4377 aaKnown RBP10.86□□□□□ -0.67
TRAP1-201ENST00000246957 FAM172BPA6NC97 362 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 FAM157AC9JC47 383 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 KNG1P01042 644 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 IGHV3-7P01780 117 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
TRAP1-201ENST00000246957 NDUFB7P17568 137 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 RCC1P18754 421 aaPredicted RBP10.86□□□□□ -0.67
TRAP1-201ENST00000246957 EDDM3BP56851 147 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 GRK1Q15835 563 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 ZNF260Q3ZCT1 412 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 CLEC2AQ6UVW9 174 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 RBMXL1Q96E39 390 aaKnown RBP10.86□□□□□ -0.67
TRAP1-201ENST00000246957 URM1Q9BTM9 101 aaKnown RBP10.86□□□□□ -0.67
TRAP1-201ENST00000246957 GHRLQ9UBU3 117 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 FBLN5Q9UBX5 448 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 KLK11Q9UBX7 282 aa10.86□□□□□ -0.67
TRAP1-201ENST00000246957 NAV3Q8IVL0 2385 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 NIPBLQ6KC79 2804 aaeCLIP10.85□□□□□ -0.677e-6■■□□□ 12.9
TRAP1-201ENST00000246957 TRAV38-1A0A0B4J264 116 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 LINC00854A0A1B0GVQ3 168 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 FABP12A6NFH5 140 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 MFNGO00587 321 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 SH2D1BO14796 132 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 PDCD6O75340 191 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 RAB6AP20340 208 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 OMGP23515 440 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 MDH2P40926 338 aaKnown RBP10.85□□□□□ -0.67
TRAP1-201ENST00000246957 LCN2P80188 198 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 CD300CQ08708 224 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 OR52W1Q6IF63 320 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 ZNF841Q6ZN19 808 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 DNM1P46Q6ZS02 220 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 TCF23Q7RTU1 214 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 Q8IYB0 196 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 PRR18Q8N4B5 295 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 H1FXQ92522 213 aaKnown RBP10.85□□□□□ -0.67
TRAP1-201ENST00000246957 S100A16Q96FQ6 103 aaKnown RBP10.85□□□□□ -0.67
TRAP1-201ENST00000246957 C19orf12Q9NSK7 152 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 F8P00451 2351 aa10.85□□□□□ -0.67
TRAP1-201ENST00000246957 TK1P04183 234 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 MUC1P15941 1255 aaPredicted RBP10.84□□□□□ -0.67
TRAP1-201ENST00000246957 HIST1H1DP16402 221 aaKnown RBP10.84□□□□□ -0.67
TRAP1-201ENST00000246957 PDLIM4P50479 330 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 GPR176Q14439 515 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 FAAP20Q6NZ36 180 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 KIF25Q9UIL4 384 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 XRCC3O43542 346 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
TRAP1-201ENST00000246957 FUT3P21217 361 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 NR4A2P43354 598 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 TMEM33P57088 247 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 BAK1Q16611 211 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 LTC4SQ16873 150 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 NHLRC3Q5JS37 347 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 SPIN3Q5JUX0 258 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 PEG10Q86TG7 708 aaKnown RBP10.84□□□□□ -0.67
TRAP1-201ENST00000246957 GDPD1Q8N9F7 314 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 OR56B1Q8NGI3 324 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 OR52I2Q8NH67 350 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 CREB3L1Q96BA8 519 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 MMP26Q9NRE1 261 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 RCC2Q9P258 522 aaKnown RBP10.84□□□□□ -0.67
TRAP1-201ENST00000246957 SLC25A10Q9UBX3 287 aaPredicted RBP10.84□□□□□ -0.67
TRAP1-201ENST00000246957 PCDHB10Q9UN67 800 aa10.84□□□□□ -0.67
TRAP1-201ENST00000246957 METTL21EPA6NDL7 271 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 C22orf46C9J442 243 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 SMAD7O15105 426 aaKnown RBP10.83□□□□□ -0.68
TRAP1-201ENST00000246957 SIGLEC5O15389 551 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 CCL3L1P16619 93 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 LMO4P61968 165 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 ZNF273Q14593 569 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 OR8H2Q8N162 312 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 RFESDQ8TAC1 157 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 RAB1CQ92928 201 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 ZNF665Q9H7R5 613 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 VWC2LB2RUY7 222 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 K7N7A8 449 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 WNT2P09544 360 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 SSTR5P35346 364 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 IL13RA1P78552 427 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 IL13RA2Q14627 380 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 PYDC2Q56P42 97 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 MRGPRDQ8TDS7 321 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 PHF21AQ96BD5 680 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 TIMD4Q96H15 378 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 SOSTQ9BQB4 213 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 PIMREGQ9BSJ6 248 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 ST6GALNAC5Q9BVH7 336 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 SRRQ9GZT4 340 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 RASL12Q9NYN1 266 aa10.83□□□□□ -0.68
TRAP1-201ENST00000246957 A0A096LNT2 108 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms