RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SMDT1Q9H4I9 107 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 RBM7Q9Y580 266 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF724A8MTY0 619 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 UMAD1C9J7I0 102 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 RPL36A-HNRNPH2H7BZ11 118 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 EWSR1Q01844 656 aaKnown RBP eCLIP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 CLINT1Q14677 625 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC25A24Q6NUK1 477 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 RNASE11Q8TAA1 199 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 GLRX2Q9NS18 164 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 DMXL1Q9Y485 3027 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 FGFBP3Q8TAT2 258 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 PLPPR2Q96GM1 343 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 LUZP4Q9P127 313 aa10.3□□□□□ -0.76
SEC61A1-201ENST00000243253 hCG_38984A0A1B0GV85 526 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 KIAA1324LA8MWY0 1029 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 RFPL3SP0C7P2 107 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 LIFP15018 202 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 P4HA3Q7Z4N8 544 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 GPR137CQ8N3F9 429 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 TMEM217Q8N7C4 229 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 OR1J1Q8NGS3 322 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 SLAMF9Q96A28 289 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 IMMP1LQ96LU5 166 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 EIF5A2Q9GZV4 153 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 METTL9Q9H1A3 318 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 P4HTMQ9NXG6 502 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 RNF115Q9Y4L5 304 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A087WZY1 265 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 H3BP45 60 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 IFNA21P01568 189 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 RPS16P62249 146 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 OR8B8Q15620 311 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 FAM209BQ5JX69 171 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 MAP1AP78559 2803 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-201ENST00000243253 SGCEO43556 437 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 UMODP07911 640 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 HERPUD1Q15011 391 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 SRSF7Q16629 238 aaKnown RBP eCLIP10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 NMSQ5H8A3 153 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF700Q9H0M5 742 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 TMED3Q9Y3Q3 217 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 GTF3C1Q12789 2109 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 KMT2EQ8IZD2 1858 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 ARHGAP21Q5T5U3 1957 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 IGHV1-45A0A0A0MS14 117 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A0J9YW62 118 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF716A6NP11 495 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF587BE7ETH6 402 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 AP4M1O00189 453 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 CEACAM1P13688 526 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 PAX9P55771 341 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 RAB35Q15286 201 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC22A25Q6T423 547 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 CALHM1Q8IU99 346 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 SPSB4Q96A44 273 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 C19orf25Q9UFG5 118 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 PITX3O75364 302 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 HLA-HP01893 362 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 CYC1P08574 325 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 SRP19P09132 144 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 HOXA5P20719 270 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 AADACP22760 399 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 SMCO1Q147U7 214 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 ELOBQ15370 118 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 PLCXD3Q63HM9 321 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 GGNQ86UU5 652 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 SPEM1Q8N4L4 309 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 LINC00469Q8N7U9 141 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 BORCS8Q96FH0 119 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 LYRM2Q9NU23 88 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 PCNX2A6NKB5 2137 aa10.28□□□□□ -0.76
SEC61A1-201ENST00000243253 A0A087WWC5 75 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 ZNF732B4DXR9 585 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 TRDCB7Z8K6 153 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 TXNL1O43396 289 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 SLC34A2O95436 690 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 P04436 131 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 CST2P09228 141 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 SELEP16581 610 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 EPHA8P29322 1005 aaPredicted RBP10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 ICAM4Q14773 271 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 CEACAM16Q2WEN9 425 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 SGCZQ96LD1 299 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 RGCCQ9H4X1 137 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 MIOXQ9UGB7 285 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 FBXO7Q9Y3I1 522 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 PLCE1Q9P212 2302 aa10.27□□□□□ -0.76
SEC61A1-201ENST00000243253 NKX2-6A6NCS4 301 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 ST8SIA3O43173 380 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 VAMP5O95183 116 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 CDS2O95674 445 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 CXCL1P09341 107 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 NQO2P16083 231 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 ATP6V0CP27449 155 aa10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 HOXA4Q00056 320 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-201ENST00000243253 IGSF11Q5DX21 431 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms