RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PHLDA2Q53GA4 152 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 BEX5Q5H9J7 111 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 ALKAL2Q6UX46 152 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 OR5T2Q8NGG2 359 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 SLX1AQ9BQ83 275 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 FZR1Q9UM11 496 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 KCNIP3Q9Y2W7 256 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 IGKV1-6A0A0C4DH72 117 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 KIR2DS1A0A191URI9 304 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 KCNAB3O43448 404 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 ZNF44P15621 663 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 KIR2DS4P43632 304 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 FABP6P51161 128 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 RAB14P61106 215 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 KIR2DS1Q14954 304 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 SP6Q3SY56 376 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 ZNF880Q6PDB4 577 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 Q6ZR03 302 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 OR11L1Q8NGX0 322 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 RASL12Q9NYN1 266 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 ATMQ13315 3056 aa15.68■□□□□ 0.1
HOXC11-201ENST00000243082 TUBAL3A6NHL2 446 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 BET1O15155 118 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 ACAA1P09110 424 aaPredicted RBP15.67■□□□□ 0.1
HOXC11-201ENST00000243082 OR5AC1P0C628 307 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 LYL1P12980 280 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 ZNF718Q3SXZ3 478 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 MBNL2Q5VZF2 373 aaKnown RBP15.67■□□□□ 0.1
HOXC11-201ENST00000243082 C11orf53Q8IXP5 236 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 SCARB1Q8WTV0 552 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 S100PBPQ96BU1 408 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 BCL2L11O43521 198 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 OR2H2O95918 312 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 TK1P04183 234 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 KCNJ3P48549 501 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 NAAAQ02083 359 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 ZNF146Q15072 292 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 TIMM23BQ5SRD1 257 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 INO80EQ8NBZ0 244 aaPredicted RBP15.67■□□□□ 0.1
HOXC11-201ENST00000243082 SFXN3Q9BWM7 321 aa15.67■□□□□ 0.1
HOXC11-201ENST00000243082 SLC33A1O00400 549 aaPredicted RBP15.66■□□□□ 0.1
HOXC11-201ENST00000243082 TIMM8AO60220 97 aaPredicted RBP15.66■□□□□ 0.1
HOXC11-201ENST00000243082 TUSC2O75896 110 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 NXPH2O95156 264 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 SPDEFO95238 335 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 RCC1P18754 421 aaPredicted RBP15.66■□□□□ 0.1
HOXC11-201ENST00000243082 GNRHRP30968 328 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 RAB32Q13637 225 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 TBR1Q16650 682 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 ESCO2Q56NI9 601 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 GGNBP1Q5YKI7 109 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 Q8NA96 180 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 DCUN1D4Q92564 292 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 MRPL24Q96A35 216 aaKnown RBP15.66■□□□□ 0.1
HOXC11-201ENST00000243082 SYT3Q9BQG1 590 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 SUCNR1Q9BXA5 334 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 HES4Q9HCC6 221 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 GSKIPQ9P0R6 139 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 KIF25Q9UIL4 384 aa15.66■□□□□ 0.1
HOXC11-201ENST00000243082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 KANTRA0A1W2PQU2 76 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 SIRPB1O00241 398 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 DIRAS3O95661 229 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 HOXD4P09016 255 aaPredicted RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 CTXN2P0C2S0 81 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 GLI4P10075 376 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 TDGF1P3P51864 188 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 PRSS54Q6PEW0 395 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 PCSK4Q6UW60 755 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 FAM219AQ8IW50 185 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 C1orf174Q8IYL3 243 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 LRTM2Q8N967 370 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 GLYATL2Q8WU03 294 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 ST8SIA2Q92186 375 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 RRNAD1Q96FB5 475 aaKnown RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 CXXC4Q9H2H0 198 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 TREM2Q9NZC2 230 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 OR5AC2Q9NZP5 309 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 K7ENP7 123 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 RLN2P04090 185 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 GCH1P30793 250 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 ZNF83P51522 516 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 UBA52P62987 128 aaKnown RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 IAH1Q2TAA2 248 aaPredicted RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 PAN3Q58A45 887 aaKnown RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 ZNF826PQ6ZT77 177 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 PLPPR1Q8TBJ4 325 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 MSI2Q96DH6 328 aaKnown RBP15.65■□□□□ 0.1
HOXC11-201ENST00000243082 MSL2Q9HCI7 577 aa15.65■□□□□ 0.1
HOXC11-201ENST00000243082 A0A1B0GWJ7 208 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 NHLH1Q02575 133 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 LIAT1Q6ZQX7 453 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 LDLRAD3Q86YD5 345 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 CCDC71LQ8N9Z2 235 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 TLNRD1Q9H1K6 362 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 ACACAQ13085 2346 aa15.64■□□□□ 0.09
HOXC11-201ENST00000243082 IGKV1D-13A0A0B4J2D9 117 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 C1QTNF9BB2RNN3 333 aa15.63■□□□□ 0.09
HOXC11-201ENST00000243082 SH2D1BO14796 132 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms