RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ASCL5Q7RTU5 278 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
NEK9-201ENST00000238616 RREB1Q92766 1687 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 PSG5Q15238 335 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 CTU2Q2VPK5 515 aaKnown RBP11.73□□□□□ -0.53
NEK9-201ENST00000238616 NUFIP2Q7Z417 695 aaKnown RBP11.73□□□□□ -0.53
NEK9-201ENST00000238616 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 DMRTA2Q96SC8 542 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 TMEM204Q9BSN7 226 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 TMEM272A0A1B0GTI8 110 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 DHRS3O75911 302 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 MDH2P40926 338 aaKnown RBP11.73□□□□□ -0.53
NEK9-201ENST00000238616 EBLN2Q6P2I7 272 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
NEK9-201ENST00000238616 ZNF552Q9H707 407 aaPredicted RBP11.73□□□□□ -0.53
NEK9-201ENST00000238616 PPM1DO15297 605 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 C1RLQ9NZP8 487 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 DHHO43323 396 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 GCAP28676 217 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 CD226Q15762 336 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 TSPO2Q5TGU0 170 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 OR8G5Q8NG78 346 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 OR10G4Q8NGN3 311 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 OR10G9Q8NGN4 311 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 OR10G7Q8NGN6 311 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 OR1L6Q8NGR2 347 aa11.73□□□□□ -0.53
NEK9-201ENST00000238616 ROS1P08922 2347 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 LOC107984156A0A0G2JMH3 177 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 TFAP2AP05549 437 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 VDAC1P21796 283 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 MMP15P51511 669 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 FAM53AQ6NSI3 398 aaPredicted RBP11.72□□□□□ -0.53
NEK9-201ENST00000238616 ARL17AQ8IVW1 177 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 OR4S2Q8NH73 311 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 SEC11CQ9BY50 192 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 TMEM129A0AVI4 362 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 STAG3L2P0CL84 134 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 MAGEA5P43359 124 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 DCTN5Q9BTE1 182 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 PRR14LQ5THK1 2151 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 GALNSP34059 522 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 FUT7Q11130 342 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 PELI3Q8N2H9 469 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 OR4P4Q8NGL7 312 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 SCN7AQ01118 1682 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 CDRT15L2A8MXV6 281 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 ELOBQ15370 118 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 MAVSQ7Z434 540 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 OR4D9Q8NGE8 314 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 ZNF831Q5JPB2 1677 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 PTPRFP10586 1907 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 CST2P09228 141 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 SUCLG1P53597 346 aaKnown RBP11.72□□□□□ -0.53
NEK9-201ENST00000238616 BTG1P62324 171 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 ADAT3Q96EY9 351 aaPredicted RBP11.72□□□□□ -0.53
NEK9-201ENST00000238616 OOEPA6NGQ2 149 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 SYNGR2O43760 224 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 IGKV3-20P01619 116 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 RNF165Q6ZSG1 346 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 DYRK2Q92630 601 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
NEK9-201ENST00000238616 RPL29P47914 159 aaKnown RBP11.71□□□□□ -0.53
NEK9-201ENST00000238616 WNT3P56703 355 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 COL5A1-AS1Q5SY13 56 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 HARBI1Q96MB7 349 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 LINC01387J3KSC0 135 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 GABRG2P18507 467 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 TOMM34Q15785 309 aaPredicted RBP11.71□□□□□ -0.53
NEK9-201ENST00000238616 CT55Q8WUE5 264 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 PERPQ96FX8 193 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 POMT2Q9UKY4 750 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.53
NEK9-201ENST00000238616 BCORQ6W2J9 1755 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 METTL12A8MUP2 240 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 GVINP1Q7Z2Y8 2422 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 RIGQ13278 110 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 NHLRC1Q6VVB1 395 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 CLN8Q9UBY8 286 aa11.71□□□□□ -0.53
NEK9-201ENST00000238616 MED13Q9UHV7 2174 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 GABRA6Q16445 453 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 CMPK2Q5EBM0 449 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 OR4X1Q8NH49 305 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 ARID2Q68CP9 1835 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 RGS13O14921 159 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 MBTPS2O43462 519 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 ETHE1O95571 254 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 DDOSTP39656 456 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 C1QBP02746 253 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 CD1EP15812 388 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 C11orf87Q6NUJ2 197 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 DHRS4L2Q6PKH6 230 aa11.71□□□□□ -0.54
NEK9-201ENST00000238616 OR10A7Q8NGE5 316 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms