RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SLC25A26Q70HW3 274 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 RIMKLAQ8IXN7 391 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 LRRC37AA6NMS7 1700 aa5.42□□□□□ -1.54
VPS13D-201ENST00000011700 C9orf170A2RU37 121 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 EPPINO95925 133 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 NUDT3O95989 172 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SQSTM1Q13501 440 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM123Q8N131 208 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM116Q8NCL8 245 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ZCCHC14Q8WYQ9 949 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 MMP25Q9NPA2 562 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PRSS50Q9UI38 385 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SLC25A5P05141 298 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 LCN15Q6UWW0 184 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 MOGAT1Q96PD6 335 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 HAPLN2Q9GZV7 340 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 WDR54Q9H977 334 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ZDHHC8Q9ULC8 765 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 KCNMB2Q9Y691 235 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SS18L1O75177 396 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 GRPP07492 148 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SLC35B1P78383 322 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TGIF2LXQ8IUE1 241 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 BHLHE23Q8NDY6 225 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 OR10AG1Q8NH19 301 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SLC37A2Q8TED4 501 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SARGQ9BW04 601 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TAPBPO15533 448 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 FRS3O43559 492 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 B3GALT4O96024 378 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM33P57088 247 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SFTPA2Q8IWL1 248 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SFTPA1Q8IWL2 248 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 LRTM2Q8N967 370 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 IL22RA2Q969J5 263 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM208Q9BTX3 173 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 IL21Q9HBE4 155 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SDCBPO00560 298 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 GUSBP08236 651 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 MELTFP08582 738 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PPP2CAP67775 309 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 MAT1AQ00266 395 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ANKRD33Q7Z3H0 272 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 DTX1Q86Y01 620 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ROBO4Q8WZ75 1007 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 NAGKQ9UJ70 344 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 B9D1Q9UPM9 204 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PPIL1Q9Y3C6 166 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 DNASE2O00115 360 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PSG9Q00887 426 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 VAX1Q5SQQ9 334 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 OVCH2Q7RTZ1 564 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 YRDCQ86U90 279 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SFXN3Q9BWM7 321 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SFT2D2O95562 160 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TMIGD3P0DMS9 266 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 CEBPDP49716 269 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PPIAP62937 165 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 TP53I13Q8NBR0 393 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 OR5M9Q8NGP3 310 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 OVOL2Q9BRP0 275 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ALKBH7Q9BT30 221 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 LINC00862A6NCI5 91 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 FABP5Q01469 135 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SHISA5Q8N114 240 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 ZDHHC16Q969W1 377 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 CHST5Q9GZS9 411 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 OR2W1Q9Y3N9 320 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 A0A1W2PPC1 479 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SLC17A3O00476 420 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 NEURL1O76050 574 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PRSS1P07477 247 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 SRD5A2P31213 254 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 UBE2L3P68036 154 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 FAM78AQ5JUQ0 283 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 FAM71F2Q6NXP2 309 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 RNASEKQ6P5S7 137 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 C5orf17Q8NAS9 161 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 PFN4Q8NHR9 129 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 STARD4Q96DR4 205 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 GPX7Q96SL4 187 aaPredicted RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 HINT3Q9NQE9 182 aaKnown RBP5.41□□□□□ -1.54
VPS13D-201ENST00000011700 OR5V1Q9UGF6 321 aa5.41□□□□□ -1.54
VPS13D-201ENST00000011700 BMPR1BO00238 502 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 VENTXO95231 258 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 SLC2A10O95528 541 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 SMIM18P0DKX4 95 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 MRPL58Q14197 206 aaKnown RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 DEFB133Q30KQ1 61 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 D2HGDHQ8N465 521 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 THOC3Q96J01 351 aaKnown RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 INSM2Q96T92 566 aaPredicted RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 IKZF4Q9H2S9 585 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 MED20Q9H944 212 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 CHODLQ9H9P2 273 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 IGLV3-16A0A075B6K0 115 aa5.4□□□□□ -1.54
VPS13D-201ENST00000011700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.4□□□□□ -1.54
VPS13D-201ENST00000011700 AQP7O14520 342 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms