RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR38, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR38	snR38	THI5	P43534	340 aa		0.28	□□□□□ -2.36
snR38	snR38	BST1	P43571	1029 aa		0.28	□□□□□ -2.36
snR38	snR38	THI11	P47183	340 aa		0.28	□□□□□ -2.36
snR38	snR38	NIT3	P49954	291 aa		0.28	□□□□□ -2.36
snR38	snR38	DIP5	P53388	608 aa		0.28	□□□□□ -2.36
snR38	snR38	YPL071C	Q02864	156 aa		0.28	□□□□□ -2.36
snR38	snR38	YMR034C	Q05131	434 aa	Predicted RBP	0.28	□□□□□ -2.36
snR38	snR38	YLR225C	Q05948	407 aa	Known RBP	0.28	□□□□□ -2.36
snR38	snR38	YLR352W	Q06479	807 aa		0.28	□□□□□ -2.36
snR38	snR38	THI13	Q07748	340 aa		0.28	□□□□□ -2.36
snR38	snR38	ZPS1	Q12512	249 aa		0.28	□□□□□ -2.36
snR38	snR38	YER175W-A	Q8TGU4	54 aa		0.28	□□□□□ -2.36
snR38	snR38	BI2	P03873	423 aa		0.27	□□□□□ -2.37
snR38	snR38	COQ3	P27680	312 aa		0.27	□□□□□ -2.37
snR38	snR38	RPT3	P33298	428 aa	Known RBP	0.27	□□□□□ -2.37
snR38	snR38	REC104	P33323	182 aa		0.27	□□□□□ -2.37
snR38	snR38	SRO77	P38163	1010 aa		0.27	□□□□□ -2.37
snR38	snR38	BZZ1	P38822	633 aa		0.27	□□□□□ -2.37
snR38	snR38	RPS26A	P39938	119 aa	Known RBP	0.27	□□□□□ -2.37
snR38	snR38	RPS26B	P39939	119 aa	Known RBP	0.27	□□□□□ -2.37
snR38	snR38	GID8	P40208	455 aa		0.27	□□□□□ -2.37
snR38	snR38	VTC3	Q02725	835 aa		0.27	□□□□□ -2.37
snR38	snR38	LCD1	Q04377	747 aa		0.27	□□□□□ -2.37
snR38	snR38	GFD1	Q04839	188 aa	Known RBP	0.27	□□□□□ -2.37
snR38	snR38	CHS5	Q12114	671 aa	Known RBP	0.27	□□□□□ -2.37
snR38	snR38	HRP1	Q99383	534 aa	Known RBP	0.27	□□□□□ -2.37
snR38	snR38	LEU2	P04173	364 aa	Predicted RBP	0.26	□□□□□ -2.37
snR38	snR38	RAD18	P10862	487 aa		0.26	□□□□□ -2.37
snR38	snR38	BIT2	P38346	545 aa		0.26	□□□□□ -2.37
snR38	snR38	TOM71	P38825	639 aa	Known RBP	0.26	□□□□□ -2.37
snR38	snR38	SET5	P38890	526 aa	Known RBP	0.26	□□□□□ -2.37
snR38	snR38	SIT1	P39980	628 aa		0.26	□□□□□ -2.37
snR38	snR38	MPS3	P47069	682 aa		0.26	□□□□□ -2.37
snR38	snR38	YGL242C	P53066	181 aa		0.26	□□□□□ -2.37
snR38	snR38	ORC4	P54791	529 aa		0.26	□□□□□ -2.37
snR38	snR38	BET4	Q00618	327 aa		0.26	□□□□□ -2.37
snR38	snR38	ARG5,6	Q01217	863 aa		0.26	□□□□□ -2.37
snR38	snR38	REC102	Q02721	264 aa		0.26	□□□□□ -2.37
snR38	snR38	GPR1	Q12361	961 aa		0.26	□□□□□ -2.37
snR38	snR38	YLR111W	Q12528	110 aa		0.26	□□□□□ -2.37
snR38	snR38	YPT1	P01123	206 aa	Known RBP	0.25	□□□□□ -2.37
snR38	snR38	RPS9B	P05755	195 aa	Known RBP	0.25	□□□□□ -2.37
snR38	snR38	ADE2	P21264	571 aa	Known RBP	0.25	□□□□□ -2.37
snR38	snR38	PRO3	P32263	286 aa	Known RBP	0.25	□□□□□ -2.37
snR38	snR38	BCS1	P32839	456 aa		0.25	□□□□□ -2.37
snR38	snR38	AVT5	P38176	459 aa		0.25	□□□□□ -2.37
snR38	snR38	KHA1	P40309	873 aa		0.25	□□□□□ -2.37
snR38	snR38	SND1	Q04007	877 aa		0.25	□□□□□ -2.37
snR38	snR38	ESF1	Q06344	628 aa	Known RBP	0.25	□□□□□ -2.37
snR38	snR38	SPN1	Q06505	410 aa	Predicted RBP	0.25	□□□□□ -2.37
snR38	snR38	YDL073W	Q07454	984 aa		0.25	□□□□□ -2.37
snR38	snR38	TLG2	Q08144	397 aa		0.25	□□□□□ -2.37
snR38	snR38	GPN2	Q08726	347 aa	Predicted RBP	0.25	□□□□□ -2.37
snR38	snR38	THI21	Q08975	551 aa		0.25	□□□□□ -2.37
snR38	snR38	CPA2	P03965	1118 aa	Known RBP	0.24	□□□□□ -2.37
snR38	snR38	YML002W	P0CF17	737 aa		0.24	□□□□□ -2.37
snR38	snR38	NAT1	P12945	854 aa	Known RBP	0.24	□□□□□ -2.37
snR38	snR38	PRP9	P19736	530 aa	Known RBP	0.24	□□□□□ -2.37
snR38	snR38	AFR1	P33304	620 aa		0.24	□□□□□ -2.37
snR38	snR38	MNN1	P39106	762 aa		0.24	□□□□□ -2.37
snR38	snR38	MBP1	P39678	833 aa		0.24	□□□□□ -2.37
snR38	snR38	EXO1	P39875	702 aa		0.24	□□□□□ -2.37
snR38	snR38	SHR5	P41912	237 aa		0.24	□□□□□ -2.37
snR38	snR38	RNY1	Q02933	434 aa	Known RBP	0.24	□□□□□ -2.37
snR38	snR38	TRS23	Q03784	219 aa		0.24	□□□□□ -2.37
snR38	snR38	FMP42	Q04991	504 aa		0.24	□□□□□ -2.37
snR38	snR38	SUB2	Q07478	446 aa	Known RBP	0.24	□□□□□ -2.37
snR38	snR38	TAH18	Q12181	623 aa		0.24	□□□□□ -2.37
snR38	snR38	WHI2	P12611	486 aa		0.23	□□□□□ -2.37
snR38	snR38	RNR1	P21524	888 aa	Known RBP	0.23	□□□□□ -2.37
snR38	snR38	DAL7	P21826	554 aa		0.23	□□□□□ -2.37
snR38	snR38	SBA1	P28707	216 aa	Known RBP	0.23	□□□□□ -2.37
snR38	snR38	GET2	P40056	285 aa		0.23	□□□□□ -2.37
snR38	snR38	TOK1	P40310	691 aa		0.23	□□□□□ -2.37
snR38	snR38	YJR061W	P40355	935 aa		0.23	□□□□□ -2.37
snR38	snR38	COQ6	P53318	479 aa		0.23	□□□□□ -2.37
snR38	snR38	YNL058C	P53947	316 aa		0.23	□□□□□ -2.37
snR38	snR38	EEB1	Q02891	456 aa		0.23	□□□□□ -2.37
snR38	snR38	HAT1	Q12341	374 aa		0.23	□□□□□ -2.37
snR38	snR38	SEC15	P22224	910 aa		0.22	□□□□□ -2.37
snR38	snR38	RPS2	P25443	254 aa	Known RBP	0.22	□□□□□ -2.37
snR38	snR38	BUD14	P27637	709 aa		0.22	□□□□□ -2.37
snR38	snR38	HXT1	P32465	570 aa		0.22	□□□□□ -2.37
snR38	snR38	PTH1	P38876	190 aa	Known RBP	0.22	□□□□□ -2.37
snR38	snR38	MAM1	P40065	302 aa		0.22	□□□□□ -2.37
snR38	snR38	YJL070C	P40361	888 aa		0.22	□□□□□ -2.37
snR38	snR38	ZDS1	P50111	915 aa	Known RBP	0.22	□□□□□ -2.37
snR38	snR38	ZIP2	P53061	704 aa		0.22	□□□□□ -2.37
snR38	snR38	RGC1	Q06108	1083 aa	Known RBP	0.22	□□□□□ -2.37
snR38	snR38	THI22	Q06490	572 aa		0.22	□□□□□ -2.37
snR38	snR38	CDC34	P14682	295 aa		0.21	□□□□□ -2.38
snR38	snR38	ACO1	P19414	778 aa	Known RBP RIP-Chip data	0.21	□□□□□ -2.38	not detected
snR38	snR38	ERG6	P25087	383 aa	Known RBP	0.21	□□□□□ -2.38
snR38	snR38	ABD1	P32783	436 aa	Predicted RBP	0.21	□□□□□ -2.38
snR38	snR38	ELF1	P36053	145 aa		0.21	□□□□□ -2.38
snR38	snR38	YHR218W	P38899	603 aa		0.21	□□□□□ -2.38
snR38	snR38	STM1	P39015	273 aa	Known RBP	0.21	□□□□□ -2.38
snR38	snR38	MET10	P39692	1035 aa		0.21	□□□□□ -2.38
snR38	snR38	YND1	P40009	630 aa		0.21	□□□□□ -2.38
snR38	snR38	TY4A-J	P47023	414 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 77.1 ms