RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W BRE5P53741 515 aaKnown RBP5.93□□□□□ -1.46
VPS28YPL065W TRE2Q08693 809 aa5.93□□□□□ -1.46
VPS28YPL065W PHO11P35842 467 aa5.92□□□□□ -1.46
VPS28YPL065W PHO12P38693 467 aa5.92□□□□□ -1.46
VPS28YPL065W HXT6P39003 570 aaKnown RBP5.92□□□□□ -1.46
VPS28YPL065W HXT7P39004 570 aa5.92□□□□□ -1.46
VPS28YPL065W YJR008WP47085 338 aa5.92□□□□□ -1.46
VPS28YPL065W FHN1P53279 174 aa5.92□□□□□ -1.46
VPS28YPL065W RPS21AP0C0V8 87 aaKnown RBP5.91□□□□□ -1.46
VPS28YPL065W SSZ1P38788 538 aaKnown RBP5.91□□□□□ -1.46
VPS28YPL065W DUG1P43616 481 aaKnown RBP5.91□□□□□ -1.46
VPS28YPL065W YJR039WP47107 1121 aa5.91□□□□□ -1.46
VPS28YPL065W YHM2Q04013 314 aa5.91□□□□□ -1.46
VPS28YPL065W ZRT2Q12436 422 aa5.91□□□□□ -1.46
VPS28YPL065W HRP1Q99383 534 aaKnown RBP5.91□□□□□ -1.46
VPS28YPL065W DID4P36108 232 aa5.9□□□□□ -1.46
VPS28YPL065W GRX7P38068 203 aa5.9□□□□□ -1.46
VPS28YPL065W GPP2P40106 250 aaKnown RBP5.9□□□□□ -1.46
VPS28YPL065W AFT2Q08957 416 aa5.9□□□□□ -1.46
VPS28YPL065W EMP70P32802 667 aa5.89□□□□□ -1.47
VPS28YPL065W TFC4P33339 1025 aa5.89□□□□□ -1.47
VPS28YPL065W MAL31P38156 614 aa5.89□□□□□ -1.47
VPS28YPL065W HRB1P38922 454 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VPS28YPL065W NUG1P40010 520 aaKnown RBP5.89□□□□□ -1.47
VPS28YPL065W NIT2P47016 307 aa5.89□□□□□ -1.47
VPS28YPL065W PEX14P53112 341 aa5.89□□□□□ -1.47
VPS28YPL065W DIA2Q08496 732 aaPredicted RBP5.89□□□□□ -1.47
VPS28YPL065W RNR1P21524 888 aaKnown RBP5.88□□□□□ -1.47
VPS28YPL065W AEP2P22136 580 aa5.88□□□□□ -1.47
VPS28YPL065W PLC1P32383 869 aa5.88□□□□□ -1.47
VPS28YPL065W OAF3P36023 863 aa5.88□□□□□ -1.47
VPS28YPL065W AKL1P38080 1108 aaKnown RBP5.88□□□□□ -1.47
VPS28YPL065W FAT1P38225 669 aa5.88□□□□□ -1.47
VPS28YPL065W YHR202WP38887 602 aa5.88□□□□□ -1.47
VPS28YPL065W BFA1P47113 574 aa5.88□□□□□ -1.47
VPS28YPL065W PEX8P53248 589 aa5.88□□□□□ -1.47
VPS28YPL065W GPD1Q00055 391 aaKnown RBP5.88□□□□□ -1.47
VPS28YPL065W HMO1Q03973 246 aaKnown RBP5.88□□□□□ -1.47
VPS28YPL065W THI7Q05998 598 aa5.88□□□□□ -1.47
VPS28YPL065W HFI1Q12060 488 aa5.88□□□□□ -1.47
VPS28YPL065W RMP1Q12530 201 aa5.88□□□□□ -1.47
VPS28YPL065W MDM10P18409 493 aa5.87□□□□□ -1.47
VPS28YPL065W PEX1P24004 1043 aa5.87□□□□□ -1.47
VPS28YPL065W SEC65P29478 273 aa5.87□□□□□ -1.47
VPS28YPL065W ORC2P32833 620 aa5.87□□□□□ -1.47
VPS28YPL065W YKR075CP36155 307 aa5.87□□□□□ -1.47
VPS28YPL065W UBS1P38290 277 aa5.87□□□□□ -1.47
VPS28YPL065W BEM4P39011 633 aa5.87□□□□□ -1.47
VPS28YPL065W SET2P46995 733 aaKnown RBP5.87□□□□□ -1.47
VPS28YPL065W MLH3Q12083 715 aa5.87□□□□□ -1.47
VPS28YPL065W ABF1P14164 731 aa5.86□□□□□ -1.47
VPS28YPL065W ERG6P25087 383 aaKnown RBP5.86□□□□□ -1.47
VPS28YPL065W SER1P33330 395 aaKnown RBP5.86□□□□□ -1.47
VPS28YPL065W APN2P38207 520 aa5.86□□□□□ -1.47
VPS28YPL065W PAC2P39937 518 aa5.86□□□□□ -1.47
VPS28YPL065W GID8P40208 455 aa5.86□□□□□ -1.47
VPS28YPL065W PTA1Q01329 785 aaPredicted RBP5.86□□□□□ -1.47
VPS28YPL065W SND1Q04007 877 aa5.86□□□□□ -1.47
VPS28YPL065W YLR407WQ06070 228 aa5.86□□□□□ -1.47
VPS28YPL065W YOL057WQ08225 711 aa5.86□□□□□ -1.47
VPS28YPL065W USV1Q12132 391 aa5.86□□□□□ -1.47
VPS28YPL065W SWI6P09959 803 aa5.85□□□□□ -1.47
VPS28YPL065W THR1P17423 357 aaKnown RBP5.85□□□□□ -1.47
VPS28YPL065W GMH1P36125 273 aa5.85□□□□□ -1.47
VPS28YPL065W GET2P40056 285 aa5.85□□□□□ -1.47
VPS28YPL065W MRK1P50873 501 aa5.85□□□□□ -1.47
VPS28YPL065W MRI1Q06489 411 aaKnown RBP5.85□□□□□ -1.47
VPS28YPL065W ISA1Q07821 250 aaPredicted RBP5.85□□□□□ -1.47
VPS28YPL065W APM4Q99186 491 aa5.85□□□□□ -1.47
VPS28YPL065W KCC4P25389 1037 aa5.84□□□□□ -1.47
VPS28YPL065W IMG2P25642 146 aaPredicted RBP5.84□□□□□ -1.47
VPS28YPL065W FUB1P25659 250 aa5.84□□□□□ -1.47
VPS28YPL065W BIT2P38346 545 aa5.84□□□□□ -1.47
VPS28YPL065W MUP3P38734 546 aa5.84□□□□□ -1.47
VPS28YPL065W ATG36P46983 293 aa5.84□□□□□ -1.47
VPS28YPL065W COX18P53239 316 aa5.84□□□□□ -1.47
VPS28YPL065W YNL034WP53963 612 aa5.84□□□□□ -1.47
VPS28YPL065W YNL018CP53976 612 aa5.84□□□□□ -1.47
VPS28YPL065W TGL2P54857 326 aa5.84□□□□□ -1.47
VPS28YPL065W YPR027CQ12079 277 aa5.84□□□□□ -1.47
VPS28YPL065W GLN4P13188 809 aaKnown RBP5.83□□□□□ -1.48
VPS28YPL065W VPS34P22543 875 aa5.83□□□□□ -1.48
VPS28YPL065W PRP28P23394 588 aa5.83□□□□□ -1.48
VPS28YPL065W YKU70P32807 602 aa5.83□□□□□ -1.48
VPS28YPL065W YNL195CP40168 261 aa5.83□□□□□ -1.48
VPS28YPL065W NOP15P53927 220 aaPredicted RBP5.83□□□□□ -1.48
VPS28YPL065W SKY1Q03656 742 aa5.83□□□□□ -1.48
VPS28YPL065W SLK19Q08581 821 aaKnown RBP5.83□□□□□ -1.48
VPS28YPL065W TMA7Q3E764 64 aaKnown RBP5.83□□□□□ -1.48
VPS28YPL065W ATP12P22135 325 aa5.82□□□□□ -1.48
VPS28YPL065W HEM12P32347 362 aaPredicted RBP5.82□□□□□ -1.48
VPS28YPL065W PIG2P40187 538 aa5.82□□□□□ -1.48
VPS28YPL065W NOP9P47077 666 aaKnown RBP5.82□□□□□ -1.48
VPS28YPL065W YMR210WQ03649 449 aa5.82□□□□□ -1.48
VPS28YPL065W YPS7Q06325 596 aa5.82□□□□□ -1.48
VPS28YPL065W MPD2Q99316 277 aa5.82□□□□□ -1.48
VPS28YPL065W HOM2P13663 365 aaKnown RBP5.81□□□□□ -1.48
VPS28YPL065W COX11P19516 300 aaKnown RBP5.81□□□□□ -1.48
VPS28YPL065W SPC105P53148 917 aa5.81□□□□□ -1.48
VPS28YPL065W ICT1Q12385 394 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms