RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W ARG2P40360 574 aa4.46□□□□□ -1.7
VPS38YLR360W BIT61P47041 543 aa4.46□□□□□ -1.7
VPS38YLR360W ATG4P53867 494 aa4.46□□□□□ -1.7
VPS38YLR360W YPS7Q06325 596 aa4.46□□□□□ -1.7
VPS38YLR360W CHS5Q12114 671 aaKnown RBP4.46□□□□□ -1.7
VPS38YLR360W TAD3Q9URQ3 322 aa4.46□□□□□ -1.7
VPS38YLR360W SWI6P09959 803 aa4.45□□□□□ -1.7
VPS38YLR360W GFA1P14742 717 aaKnown RBP4.45□□□□□ -1.7
VPS38YLR360W PRP28P23394 588 aa4.45□□□□□ -1.7
VPS38YLR360W KIN82P25341 720 aa4.45□□□□□ -1.7
VPS38YLR360W DMC1P25453 334 aa4.45□□□□□ -1.7
VPS38YLR360W DID4P36108 232 aa4.45□□□□□ -1.7
VPS38YLR360W HXT6P39003 570 aaKnown RBP4.45□□□□□ -1.7
VPS38YLR360W HXT7P39004 570 aa4.45□□□□□ -1.7
VPS38YLR360W DUN1P39009 513 aa4.45□□□□□ -1.7
VPS38YLR360W MNN11P46985 422 aaKnown RBP4.45□□□□□ -1.7
VPS38YLR360W RFX1P48743 811 aa4.45□□□□□ -1.7
VPS38YLR360W VPS73P53142 486 aaKnown RBP4.45□□□□□ -1.7
VPS38YLR360W NOP15P53927 220 aaPredicted RBP4.45□□□□□ -1.7
VPS38YLR360W PTA1Q01329 785 aaPredicted RBP4.45□□□□□ -1.7
VPS38YLR360W RCR2Q03446 210 aaKnown RBP4.45□□□□□ -1.7
VPS38YLR360W RPS17AP02407 136 aaKnown RBP4.44□□□□□ -1.7
VPS38YLR360W RPS21AP0C0V8 87 aaKnown RBP4.44□□□□□ -1.7
VPS38YLR360W RPS17BP14127 136 aaKnown RBP4.44□□□□□ -1.7
VPS38YLR360W HCA4P20448 770 aaKnown RBP4.44□□□□□ -1.7
VPS38YLR360W PRP22P24384 1145 aaKnown RBP4.44□□□□□ -1.7
VPS38YLR360W YEN1P40028 759 aa4.44□□□□□ -1.7
VPS38YLR360W PXA1P41909 870 aa4.44□□□□□ -1.7
VPS38YLR360W CCT7P42943 550 aaKnown RBP4.44□□□□□ -1.7
VPS38YLR360W MPS3P47069 682 aa4.44□□□□□ -1.7
VPS38YLR360W YGL081WP53156 320 aa4.44□□□□□ -1.7
VPS38YLR360W YGR151CP53287 111 aa4.44□□□□□ -1.7
VPS38YLR360W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VPS38YLR360W GLN4P13188 809 aaKnown RBP4.43□□□□□ -1.7
VPS38YLR360W ABF1P14164 731 aa4.43□□□□□ -1.7
VPS38YLR360W SEC6P32844 805 aa4.43□□□□□ -1.7
VPS38YLR360W YPT7P32939 208 aa4.43□□□□□ -1.7
VPS38YLR360W SET3P36124 751 aa4.43□□□□□ -1.7
VPS38YLR360W UBP12P39538 1254 aa4.43□□□□□ -1.7
VPS38YLR360W YFT2Q06676 274 aa4.43□□□□□ -1.7
VPS38YLR360W YDL086WQ07505 273 aa4.43□□□□□ -1.7
VPS38YLR360W IME1P21190 360 aa4.42□□□□□ -1.7
VPS38YLR360W FUB1P25659 250 aa4.42□□□□□ -1.7
VPS38YLR360W OAF3P36023 863 aa4.42□□□□□ -1.7
VPS38YLR360W FAT1P38225 669 aa4.42□□□□□ -1.7
VPS38YLR360W UBS1P38290 277 aa4.42□□□□□ -1.7
VPS38YLR360W YHR097CP38809 366 aaKnown RBP4.42□□□□□ -1.7
VPS38YLR360W BDH2P39713 417 aa4.42□□□□□ -1.7
VPS38YLR360W BUD8P41698 603 aa4.42□□□□□ -1.7
VPS38YLR360W TAH11P47112 604 aa4.42□□□□□ -1.7
VPS38YLR360W STP4Q07351 490 aa4.42□□□□□ -1.7
VPS38YLR360W HFI1Q12060 488 aa4.42□□□□□ -1.7
VPS38YLR360W TSR4P25040 408 aa4.41□□□□□ -1.7
VPS38YLR360W NTH1P32356 751 aa4.41□□□□□ -1.7
VPS38YLR360W GMH1P36125 273 aa4.41□□□□□ -1.7
VPS38YLR360W KSP1P38691 1029 aaKnown RBP4.41□□□□□ -1.7
VPS38YLR360W KHA1P40309 873 aa4.41□□□□□ -1.7
VPS38YLR360W NMA2P53204 395 aa4.41□□□□□ -1.7
VPS38YLR360W SPC98P53540 846 aa4.41□□□□□ -1.7
VPS38YLR360W PPN1Q04119 674 aa4.41□□□□□ -1.7
VPS38YLR360W SUT2Q12286 268 aa4.41□□□□□ -1.7
VPS38YLR360W TAF3Q12297 353 aa4.41□□□□□ -1.7
VPS38YLR360W PPZ2P33329 710 aa4.4□□□□□ -1.71
VPS38YLR360W CTP1P38152 299 aa4.4□□□□□ -1.71
VPS38YLR360W KCC4P25389 1037 aa4.39□□□□□ -1.71
VPS38YLR360W DAL3P32459 195 aa4.39□□□□□ -1.71
VPS38YLR360W GRX4P32642 244 aa4.39□□□□□ -1.71
VPS38YLR360W YIL166CP40445 542 aa4.39□□□□□ -1.71
VPS38YLR360W VID28P40547 921 aa4.39□□□□□ -1.71
VPS38YLR360W TAF4P50105 388 aa4.39□□□□□ -1.71
VPS38YLR360W DIP5P53388 608 aa4.39□□□□□ -1.71
VPS38YLR360W YSH1Q06224 779 aaPredicted RBP4.39□□□□□ -1.71
VPS38YLR360W APM4Q99186 491 aa4.39□□□□□ -1.71
VPS38YLR360W APL3P38065 1025 aa4.38□□□□□ -1.71
VPS38YLR360W YHR033WP38690 423 aa4.38□□□□□ -1.71
VPS38YLR360W IES1P43579 692 aa4.38□□□□□ -1.71
VPS38YLR360W SPO1P53541 631 aa4.38□□□□□ -1.71
VPS38YLR360W RMP1Q12530 201 aa4.38□□□□□ -1.71
VPS38YLR360W PRE4P30657 266 aa4.37□□□□□ -1.71
VPS38YLR360W DGR2P32330 852 aa4.37□□□□□ -1.71
VPS38YLR360W EUG1P32474 517 aa4.37□□□□□ -1.71
VPS38YLR360W MSS1P32559 526 aaPredicted RBP4.37□□□□□ -1.71
VPS38YLR360W EMP70P32802 667 aa4.37□□□□□ -1.71
VPS38YLR360W ELF1P36053 145 aa4.37□□□□□ -1.71
VPS38YLR360W TMN3P40071 706 aa4.37□□□□□ -1.71
VPS38YLR360W RNR4P49723 345 aaKnown RBP4.37□□□□□ -1.71
VPS38YLR360W YPR027CQ12079 277 aa4.37□□□□□ -1.71
VPS38YLR360W LAM4P38800 1345 aa4.36□□□□□ -1.71
VPS38YLR360W SPO11P23179 398 aa4.36□□□□□ -1.71
VPS38YLR360W PEX2P32800 271 aa4.36□□□□□ -1.71
VPS38YLR360W DUG1P43616 481 aaKnown RBP4.36□□□□□ -1.71
VPS38YLR360W APM1Q00776 475 aaPredicted RBP4.36□□□□□ -1.71
VPS38YLR360W NSE5Q03718 556 aa4.36□□□□□ -1.71
VPS38YLR360W IZH3Q07959 543 aa4.36□□□□□ -1.71
VPS38YLR360W TRE2Q08693 809 aa4.36□□□□□ -1.71
VPS38YLR360W RPN13O13563 156 aa4.35□□□□□ -1.71
VPS38YLR360W CDC26P14724 124 aa4.35□□□□□ -1.71
VPS38YLR360W SER1P33330 395 aaKnown RBP4.35□□□□□ -1.71
VPS38YLR360W CRG1P38892 291 aaRIP-Chip data4.35□□□□□ -1.71not detected
VPS38YLR360W GPP2P40106 250 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms