RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	FEN2	P25621	512 aa	Known RBP	3.42	□□□□□ -1.86
SPE1	YKL184W	CKB2	P38930	258 aa		3.42	□□□□□ -1.86
SPE1	YKL184W	NUG1	P40010	520 aa	Known RBP	3.42	□□□□□ -1.86
SPE1	YKL184W	YIL077C	P40508	320 aa		3.42	□□□□□ -1.86
SPE1	YKL184W	ARO10	Q06408	635 aa		3.42	□□□□□ -1.86
SPE1	YKL184W	SLK19	Q08581	821 aa	Known RBP	3.42	□□□□□ -1.86
SPE1	YKL184W	YNL162W-A	Q3E7A8	72 aa		3.42	□□□□□ -1.86
SPE1	YKL184W	BNR1	P40450	1375 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	RPA135	P22138	1203 aa	Known RBP	3.41	□□□□□ -1.86
SPE1	YKL184W	PRP19	P32523	503 aa	Known RBP	3.41	□□□□□ -1.86
SPE1	YKL184W	CTP1	P38152	299 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	PXA1	P41909	870 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	RET2	P43621	546 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	MPS3	P47069	682 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	PPN1	Q04119	674 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	COQ11	Q05892	277 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	AIM44	Q99299	758 aa		3.41	□□□□□ -1.86
SPE1	YKL184W	IMG2	P25642	146 aa	Predicted RBP	3.4	□□□□□ -1.87
SPE1	YKL184W	SET3	P36124	751 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	UBS1	P38290	277 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	COS111	P38308	924 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	KSP1	P38691	1029 aa	Known RBP	3.4	□□□□□ -1.87
SPE1	YKL184W	BEM4	P39011	633 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	BIT61	P47041	543 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	IMO32	P53219	342 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	DNM1	P54861	757 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	YLR407W	Q06070	228 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	RGC1	Q06108	1083 aa	Known RBP	3.4	□□□□□ -1.87
SPE1	YKL184W	YSH1	Q06224	779 aa	Predicted RBP	3.4	□□□□□ -1.87
SPE1	YKL184W	YFT2	Q06676	274 aa		3.4	□□□□□ -1.87
SPE1	YKL184W	BMS1	Q08965	1183 aa	Known RBP	3.4	□□□□□ -1.87
SPE1	YKL184W	EMP70	P32802	667 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	MUP3	P38734	546 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	KHA1	P40309	873 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	ATG36	P46983	293 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	PMT3	P47190	753 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	YGR153W	P48238	217 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	RFX1	P48743	811 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	VPS36	Q06696	566 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	THI73	Q07904	523 aa		3.39	□□□□□ -1.87
SPE1	YKL184W	YKU70	P32807	602 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	SEC6	P32844	805 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	TYS1	P36421	394 aa	Known RBP	3.38	□□□□□ -1.87
SPE1	YKL184W	YHR097C	P38809	366 aa	Known RBP	3.38	□□□□□ -1.87
SPE1	YKL184W	PAC2	P39937	518 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	THI6	P41835	540 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	YJR096W	P47137	282 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	MRK1	P50873	501 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	NMA2	P53204	395 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	DIP5	P53388	608 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	MDM20	Q12387	796 aa	Known RBP	3.38	□□□□□ -1.87
SPE1	YKL184W	YGR161W-C	Q3E744	92 aa		3.38	□□□□□ -1.87
SPE1	YKL184W	FPR3	P38911	411 aa	Known RBP	3.37	□□□□□ -1.87
SPE1	YKL184W	DUN1	P39009	513 aa		3.37	□□□□□ -1.87
SPE1	YKL184W	NGL2	Q03264	515 aa	Known RBP	3.37	□□□□□ -1.87
SPE1	YKL184W	LAM4	P38800	1345 aa		3.37	□□□□□ -1.87
SPE1	YKL184W	STE12	P13574	688 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
SPE1	YKL184W	ORC2	P32833	620 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	FLO10	P36170	1169 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	PMT6	P42934	759 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	GZF3	P42944	551 aa	Known RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	DAK1	P54838	584 aa	Known RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	UFO1	Q04511	668 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	HOF1	Q05080	669 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	RKI1	Q12189	258 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	NUP145	P49687	1317 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	ADE5,7	P07244	802 aa	Known RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	VPS34	P22543	875 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	SEC65	P29478	273 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	UGP1	P32861	499 aa	Known RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	ELF1	P36053	145 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	DID4	P36108	232 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	CCT5	P40413	562 aa	Known RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	SPO1	P53541	631 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	NOP15	P53927	220 aa	Predicted RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	PTA1	Q01329	785 aa	Predicted RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	UME1	Q03010	460 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	HFD1	Q04458	532 aa		3.36	□□□□□ -1.87
SPE1	YKL184W	MRI1	Q06489	411 aa	Known RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	YTM1	Q12024	460 aa	Predicted RBP	3.36	□□□□□ -1.87
SPE1	YKL184W	RPS17A	P02407	136 aa	Known RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	SWI6	P09959	803 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	HOM2	P13663	365 aa	Known RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	RPS17B	P14127	136 aa	Known RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	SAT4	P25333	603 aa	Known RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	YPT7	P32939	208 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	YMC2	P38087	329 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	PMC1	P38929	1173 aa	Predicted RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	FMP30	Q02883	468 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	CEF1	Q03654	590 aa	Predicted RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	MTQ2	Q03920	221 aa	Predicted RBP	3.35	□□□□□ -1.87
SPE1	YKL184W	YHM2	Q04013	314 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	THI7	Q05998	598 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	YPS7	Q06325	596 aa		3.35	□□□□□ -1.87
SPE1	YKL184W	BUD8	P41698	603 aa		3.34	□□□□□ -1.88
SPE1	YKL184W	TAF4	P50105	388 aa		3.34	□□□□□ -1.88
SPE1	YKL184W	YNR029C	P53729	429 aa	Known RBP	3.34	□□□□□ -1.88
SPE1	YKL184W	RCR2	Q03446	210 aa	Known RBP	3.34	□□□□□ -1.88
SPE1	YKL184W	IZH3	Q07959	543 aa		3.34	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms