RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 CEP57L1Q8IYX8 460 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 FMR1NBQ8N0W7 255 aaPredicted RBP11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 NCOA5Q9HCD5 579 aaKnown RBP11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 KCND1Q9NSA2 647 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 AKAP2Q9Y2D5 859 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
SAMMSON-218ENST00000641601 BECN2A8MW95 431 aa11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 YEATS4O95619 227 aa11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 TNNT1P13805 278 aa11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 IMMTQ16891 758 aaKnown RBP11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 BPIFA3Q9BQP9 254 aa11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 CEP126Q9P2H0 1117 aa11.83□□□□□ -0.51
SAMMSON-218ENST00000641601 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 SLFNL1Q499Z3 407 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 BRAPQ7Z569 592 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 OSBP2Q969R2 916 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 PKNOX2Q96KN3 472 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 C16orf45Q96MC5 204 aaPredicted RBP11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 PCDHA7Q9UN72 937 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
SAMMSON-218ENST00000641601 DHX8Q14562 1220 aaKnown RBP11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 BRINP3Q76B58 766 aa11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 MB21D2Q8IYB1 491 aaPredicted RBP11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 LINC00301Q8NCQ3 95 aa11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 ZNF594Q96JF6 807 aaPredicted RBP11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
SAMMSON-218ENST00000641601 FOXP2O15409 715 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 FOSBP53539 338 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 GSDMDP57764 484 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 TRIM28Q13263 835 aaKnown RBP11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 CABLES1Q8TDN4 633 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 APPBP2Q92624 585 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 PLA2G12BQ9BX93 195 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 FAM177BA6PVY3 158 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 A1BGP04217 495 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 CCDC112Q8NEF3 446 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 PUS3Q9BZE2 481 aaKnown RBP11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 NAP1L2Q9ULW6 460 aaPredicted RBP11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 WDR17Q8IZU2 1322 aa11.81□□□□□ -0.52
SAMMSON-218ENST00000641601 ATRNO75882 1429 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 PRC1O43663 620 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 SKILP12757 684 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 CCZ1BP86790 482 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 CCZ1P86791 482 aaPredicted RBP11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 TCIRG1Q13488 830 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 STK38Q15208 465 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 UTP14CQ5TAP6 766 aaKnown RBP11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 CEP135Q66GS9 1140 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 CHST3Q7LGC8 479 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 NCOA7Q8NI08 942 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 FEZ1Q99689 392 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 SDF4Q9BRK5 362 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 OSBPL5Q9H0X9 879 aaPredicted RBP11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
SAMMSON-218ENST00000641601 KLF18A0A0U1RQI7 1052 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 SPTLC2O15270 562 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 FGAP02671 866 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 NDUFA8P51970 172 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 AKAP11Q9UKA4 1901 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 CSF1RP07333 972 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 KCNJ6P48051 423 aa11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
SAMMSON-218ENST00000641601 WASHC4Q2M389 1173 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms