RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SNAP23O00161 211 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 GOLIM4O00461 696 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 SGSM2O43147 1006 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 GRAPQ13588 217 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 CRY2Q49AN0 593 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
PHGDH-221ENST00000641573 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-221ENST00000641573 RPGRQ92834 1020 aaKnown RBP15.84■□□□□ 0.13
PHGDH-221ENST00000641573 ZNF512BQ96KM6 892 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-221ENST00000641573 PAG1Q9NWQ8 432 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 HACL1Q9UJ83 578 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 COL11A2P13942 1736 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-221ENST00000641573 WDR33Q9C0J8 1336 aaKnown RBP15.84■□□□□ 0.13
PHGDH-221ENST00000641573 RFX7Q2KHR2 1363 aa15.84■□□□□ 0.13
PHGDH-221ENST00000641573 UQCRFS1P1P0C7P4 283 aa15.83■□□□□ 0.12
PHGDH-221ENST00000641573 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.12
PHGDH-221ENST00000641573 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
PHGDH-221ENST00000641573 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
PHGDH-221ENST00000641573 PNMA8AQ86V59 439 aaPredicted RBP15.83■□□□□ 0.12
PHGDH-221ENST00000641573 KBTBD3Q8NAB2 608 aa15.83■□□□□ 0.12
PHGDH-221ENST00000641573 RBM17Q96I25 401 aaKnown RBP15.83■□□□□ 0.12
PHGDH-221ENST00000641573 ANKRD2Q9GZV1 360 aa15.83■□□□□ 0.12
PHGDH-221ENST00000641573 IL25Q9H293 177 aa15.83■□□□□ 0.12
PHGDH-221ENST00000641573 ARAP2Q8WZ64 1704 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 TAF1P21675 1872 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 PHKA1P46020 1223 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 FKBP4Q02790 459 aaKnown RBP eCLIP15.82■□□□□ 0.12
PHGDH-221ENST00000641573 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 SCARF1Q14162 830 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 STYK1Q6J9G0 422 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-221ENST00000641573 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 SNRKQ9NRH2 765 aa15.82■□□□□ 0.12
PHGDH-221ENST00000641573 ARID4AP29374 1257 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-221ENST00000641573 HOXA10P31260 410 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-221ENST00000641573 EPHX2P34913 555 aa15.81■□□□□ 0.12
PHGDH-221ENST00000641573 RGS19P49795 217 aa15.81■□□□□ 0.12
PHGDH-221ENST00000641573 SLC51AQ86UW1 340 aa15.81■□□□□ 0.12
PHGDH-221ENST00000641573 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
PHGDH-221ENST00000641573 FAM227BQ96M60 508 aa15.81■□□□□ 0.12
PHGDH-221ENST00000641573 RAD50Q92878 1312 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 EPB41L2O43491 1005 aaKnown RBP15.8■□□□□ 0.12
PHGDH-221ENST00000641573 MCAMP43121 646 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 ZAP70P43403 619 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 KIAA1211Q6ZU35 1233 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 MASTLQ96GX5 879 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 CRAMP1Q96RY5 1269 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 ANTXR1Q9H6X2 564 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
PHGDH-221ENST00000641573 A0A0D9SFI3 127 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 SRGNP10124 158 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 ECE1P42892 770 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 KCNJ4P48050 445 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 BCAMP50895 628 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 GRM1Q13255 1194 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-221ENST00000641573 PI16Q6UXB8 463 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 KIF2CQ99661 725 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 LSG1Q9H089 658 aaKnown RBP15.79■□□□□ 0.12
PHGDH-221ENST00000641573 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
PHGDH-221ENST00000641573 SLX4Q8IY92 1834 aa15.78■□□□□ 0.12
PHGDH-221ENST00000641573 ZNF541Q9H0D2 1346 aa15.78■□□□□ 0.12
PHGDH-221ENST00000641573 WTIPA6NIX2 430 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-221ENST00000641573 MCCP23508 829 aa15.78■□□□□ 0.12
PHGDH-221ENST00000641573 HMG20BQ9P0W2 317 aa15.78■□□□□ 0.12
PHGDH-221ENST00000641573 RNF113AO15541 343 aaKnown RBP15.77■□□□□ 0.12
PHGDH-221ENST00000641573 BBOX1O75936 387 aa15.77■□□□□ 0.12
PHGDH-221ENST00000641573 LRRFIP1Q32MZ4 808 aaKnown RBP15.77■□□□□ 0.12
PHGDH-221ENST00000641573 SPATA5Q8NB90 893 aa15.77■□□□□ 0.12
PHGDH-221ENST00000641573 CAPNS2Q96L46 248 aa15.77■□□□□ 0.12
PHGDH-221ENST00000641573 ADAMTSL1Q8N6G6 1762 aa15.77■□□□□ 0.11
PHGDH-221ENST00000641573 MED23Q9ULK4 1368 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 ZNF804BA4D1E1 1349 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 CHGBP05060 677 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 CYP2E1P05181 493 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-221ENST00000641573 NPR1P16066 1061 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 GYG1P46976 350 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 RASGRF1Q13972 1273 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 BECN1Q14457 450 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 TTF1Q15361 905 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-221ENST00000641573 MCMDC2Q4G0Z9 681 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 CAVIN4Q5BKX8 364 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 ZMYM1Q5SVZ6 1142 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 GPR101Q96P66 508 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-221ENST00000641573 PIH1D3Q9NQM4 214 aaKnown RBP15.76■□□□□ 0.11
PHGDH-221ENST00000641573 ZNF277Q9NRM2 450 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-221ENST00000641573 HELLSQ9NRZ9 838 aa15.76■□□□□ 0.11
PHGDH-221ENST00000641573 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
PHGDH-221ENST00000641573 XDHP47989 1333 aa15.75■□□□□ 0.11
PHGDH-221ENST00000641573 CCDC171Q6TFL3 1326 aa15.75■□□□□ 0.11
PHGDH-221ENST00000641573 PTH1RQ03431 593 aa15.75■□□□□ 0.11
PHGDH-221ENST00000641573 FBXO33Q7Z6M2 555 aa15.75■□□□□ 0.11
PHGDH-221ENST00000641573 FAM84BQ96KN1 310 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-221ENST00000641573 ANKIB1Q9P2G1 1089 aa15.75■□□□□ 0.11
PHGDH-221ENST00000641573 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-221ENST00000641573 LEMD3Q9Y2U8 911 aa15.75■□□□□ 0.11
PHGDH-221ENST00000641573 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
PHGDH-221ENST00000641573 ZFYP08048 801 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-221ENST00000641573 KLRK1P26718 216 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms