RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 VPS18Q9P253 973 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 JCADQ9P266 1359 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 CASQ1P31415 396 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 PDE6BP35913 854 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 FOXO4P98177 505 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 CCDC69A6NI79 296 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 HLFQ16534 295 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 CENPHQ9H3R5 247 aa13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-224ENST00000641259 PDILTQ8N807 584 aa13.79□□□□□ -0.2
RBFOX1-224ENST00000641259 H7C1W4 665 aa13.79□□□□□ -0.2
RBFOX1-224ENST00000641259 TDO2P48775 406 aa13.79□□□□□ -0.2
RBFOX1-224ENST00000641259 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-224ENST00000641259 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
RBFOX1-224ENST00000641259 JRKLQ9Y4A0 524 aa13.79□□□□□ -0.2
RBFOX1-224ENST00000641259 PPARDQ03181 441 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 PTPN12Q05209 780 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 HSP90B2PQ58FF3 399 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 ICE2Q659A1 982 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 SYNE4Q8N205 404 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 CBX8Q9HC52 389 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 HSP90AA4PQ58FG1 418 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 EAF2Q96CJ1 260 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 ERO1AQ96HE7 468 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 RRP15Q9Y3B9 282 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 H3BQV1 296 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 CLCN6P51797 869 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
RBFOX1-224ENST00000641259 CLGNO14967 610 aa13.77□□□□□ -0.2
RBFOX1-224ENST00000641259 ZSCAN22P10073 491 aaPredicted RBP13.77□□□□□ -0.2
RBFOX1-224ENST00000641259 PTPN21Q16825 1174 aa13.77□□□□□ -0.2
RBFOX1-224ENST00000641259 SPATA32Q96LK8 384 aa13.77□□□□□ -0.2
RBFOX1-224ENST00000641259 COL15A1P39059 1388 aa13.77□□□□□ -0.2
RBFOX1-224ENST00000641259 STARD3NLO95772 234 aa13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 SYT1P21579 422 aa13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 FAM182BQ5T319 152 aa13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 ITPK1Q13572 414 aa13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-224ENST00000641259 BIN1O00499 593 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 GJB2P29033 226 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 MCM2P49736 904 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 KCNQ4P56696 695 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 KRT85P78386 507 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 VPS72Q15906 364 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 FNBP4Q8N3X1 1017 aaPredicted RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 A0A1B0GUL7 405 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CTIFO43310 598 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CYP2E1P05181 493 aaPredicted RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 LIG1P18858 919 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 HSPA1LP34931 641 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 AACSQ86V21 672 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CCDC8Q9H0W5 538 aaPredicted RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 CHMLP26374 656 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 HSP90AB4PQ58FF6 505 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 INTS5Q6P9B9 1019 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 TMC6Q7Z403 805 aa13.76□□□□□ -0.21
RBFOX1-224ENST00000641259 AOX1Q06278 1338 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 PNMA6AP0CW24 399 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 TCIRG1Q13488 830 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 TEX13AQ9BXU3 409 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 ANKRD36CQ5JPF3 1778 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 NUP98P52948 1817 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 GPTP24298 496 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 CYP2C19P33261 490 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 DDX11Q96FC9 970 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 MAP3K15Q6ZN16 1313 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 CLASRPQ8N2M8 674 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 FAM89AQ96GI7 184 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
RBFOX1-224ENST00000641259 RREB1Q92766 1687 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 ZNF75DP51815 510 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 CCDC144CPQ8IYA2 1237 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 STK11IPQ8N1F8 1099 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 TFCP2Q12800 502 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 ESYT1Q9BSJ8 1104 aa13.74□□□□□ -0.21
RBFOX1-224ENST00000641259 COPRSQ9NQ92 184 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms