RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 UTP14AQ9BVJ6 771 aaKnown RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 PIH1D3Q9NQM4 214 aaKnown RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
PHGDH-211ENST00000641213 CCT2P78371 535 aaKnown RBP20.12■□□□□ 0.81
PHGDH-211ENST00000641213 LPIN2Q92539 896 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 SPATA32Q96LK8 384 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 PTPDC1A2A3K4 754 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 FAM177BA6PVY3 158 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 UQCRFS1P1P0C7P4 283 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 HMGN5P82970 282 aaKnown RBP20.12■□□□□ 0.81
PHGDH-211ENST00000641213 SLC9C2Q5TAH2 1124 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 ZSCAN30Q86W11 494 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 NCOA5Q9HCD5 579 aaKnown RBP20.12■□□□□ 0.81
PHGDH-211ENST00000641213 CHD4Q14839 1912 aa20.12■□□□□ 0.81
PHGDH-211ENST00000641213 EVCP57679 992 aa20.11■□□□□ 0.81
PHGDH-211ENST00000641213 LEO1Q8WVC0 666 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-211ENST00000641213 FUCA2Q9BTY2 467 aa20.11■□□□□ 0.81
PHGDH-211ENST00000641213 ZSCAN16Q9H4T2 348 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-211ENST00000641213 SALL1Q9NSC2 1324 aa20.11■□□□□ 0.81
PHGDH-211ENST00000641213 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
PHGDH-211ENST00000641213 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
PHGDH-211ENST00000641213 GIMAP6Q6P9H5 292 aa20.11■□□□□ 0.81
PHGDH-211ENST00000641213 MB21D2Q8IYB1 491 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-211ENST00000641213 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-211ENST00000641213 ZNF831Q5JPB2 1677 aa20.1■□□□□ 0.81
PHGDH-211ENST00000641213 UBE3CQ15386 1083 aa20.1■□□□□ 0.81
PHGDH-211ENST00000641213 NAA16Q6N069 864 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-211ENST00000641213 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
PHGDH-211ENST00000641213 ZNF213O14771 459 aa20.09■□□□□ 0.81
PHGDH-211ENST00000641213 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
PHGDH-211ENST00000641213 GPHNQ9NQX3 736 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-211ENST00000641213 LIG1P18858 919 aa20.09■□□□□ 0.81
PHGDH-211ENST00000641213 MCM5P33992 734 aa20.09■□□□□ 0.81
PHGDH-211ENST00000641213 NCOA7Q8NI08 942 aa20.09■□□□□ 0.81
PHGDH-211ENST00000641213 KIF3AQ9Y496 699 aa20.09■□□□□ 0.81
PHGDH-211ENST00000641213 PRC1O43663 620 aa20.08■□□□□ 0.81
PHGDH-211ENST00000641213 NTSR2O95665 410 aa20.08■□□□□ 0.81
PHGDH-211ENST00000641213 SLC5A1P13866 664 aa20.08■□□□□ 0.81
PHGDH-211ENST00000641213 CHMP4CQ96CF2 233 aa20.08■□□□□ 0.81
PHGDH-211ENST00000641213 MPHOSPH8Q99549 860 aa20.08■□□□□ 0.81
PHGDH-211ENST00000641213 NIP7Q9Y221 180 aaKnown RBP eCLIP20.08■□□□□ 0.81
PHGDH-211ENST00000641213 ZNF532Q9HCE3 1301 aa20.08■□□□□ 0.8
PHGDH-211ENST00000641213 TCRBV5S4A2TA0A5A2 114 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 KCNQ2O43526 872 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 PDE6AP16499 860 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 ANTXR2P58335 489 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 WWC3Q9ULE0 1092 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 A0A1B0GUL6 1792 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 GOLGA6L4A6NEF3 574 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 CCDC152Q4G0S7 254 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 SMARCC1Q92922 1105 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-211ENST00000641213 NBPF3Q9H094 633 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 RTL9Q8NET4 1388 aa20.07■□□□□ 0.8
PHGDH-211ENST00000641213 SNAP23O00161 211 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 FOSBP53539 338 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 SPATA5Q8NB90 893 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 TAF1P21675 1872 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 ADD1P35611 737 aaKnown RBP20.06■□□□□ 0.8
PHGDH-211ENST00000641213 RALYLQ86SE5 291 aaKnown RBP20.06■□□□□ 0.8
PHGDH-211ENST00000641213 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 PGBD1Q96JS3 809 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 CFAP45Q9UL16 551 aa20.06■□□□□ 0.8
PHGDH-211ENST00000641213 NOL7Q9UMY1 257 aaKnown RBP20.06■□□□□ 0.8
PHGDH-211ENST00000641213 COL4A1P02462 1669 aa20.05■□□□□ 0.8
PHGDH-211ENST00000641213 CARMIL3Q8ND23 1372 aa20.05■□□□□ 0.8
PHGDH-211ENST00000641213 FDPSP14324 419 aaKnown RBP20.05■□□□□ 0.8
PHGDH-211ENST00000641213 NUP62CLQ9H1M0 184 aa20.05■□□□□ 0.8
PHGDH-211ENST00000641213 PPFIA3O75145 1194 aa20.04■□□□□ 0.8
PHGDH-211ENST00000641213 RASGRF1Q13972 1273 aa20.04■□□□□ 0.8
PHGDH-211ENST00000641213 KLF18A0A0U1RQI7 1052 aa20.04■□□□□ 0.8
PHGDH-211ENST00000641213 MSNP26038 577 aaKnown RBP20.04■□□□□ 0.8
PHGDH-211ENST00000641213 IGHMBP2P38935 993 aaKnown RBP20.04■□□□□ 0.8
PHGDH-211ENST00000641213 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
PHGDH-211ENST00000641213 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.04■□□□□ 0.8
PHGDH-211ENST00000641213 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
PHGDH-211ENST00000641213 HPS5Q9UPZ3 1129 aa20.04■□□□□ 0.8
PHGDH-211ENST00000641213 APPP05067 770 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 TBC1D10CQ8IV04 446 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 STRBPQ96SI9 672 aaKnown RBP20.03■□□□□ 0.8
PHGDH-211ENST00000641213 CCDC192P0DO97 292 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 PIP4K2BP78356 416 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 CAMK4Q16566 473 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 MAP3K11Q16584 847 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 AIDAQ96BJ3 306 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 ZNF652Q9Y2D9 606 aa20.03■□□□□ 0.8
PHGDH-211ENST00000641213 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
PHGDH-211ENST00000641213 DDX19AQ9NUU7 478 aaKnown RBP20.02■□□□□ 0.8
PHGDH-211ENST00000641213 USP25Q9UHP3 1055 aa20.02■□□□□ 0.8
PHGDH-211ENST00000641213 DENND2AQ9ULE3 1009 aa20.02■□□□□ 0.8
PHGDH-211ENST00000641213 GUCY1B3Q02153 619 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 MAP3K12Q12852 859 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 TRDNQ13061 729 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 MAGEB6Q8N7X4 407 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 ECM29Q5VYK3 1845 aa20.01■□□□□ 0.79
PHGDH-211ENST00000641213 DHX16O60231 1041 aaKnown RBP20.01■□□□□ 0.79
PHGDH-211ENST00000641213 CEBPZQ03701 1054 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms