RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	SRP68	Q9UHB9	627 aa	Known RBP	13.42	□□□□□ -0.26
GFAP-238	ENST00000640859	SCN7A	Q01118	1682 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	FSD2	A1L4K1	749 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859		M0R2C6	588 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	CYP21A2	P08686	494 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	MMP10	P09238	476 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	UQCRFS1P1	P0C7P4	283 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	HSPD1	P10809	573 aa	Known RBP	13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	ARID4A	P29374	1257 aa	Predicted RBP	13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	MCAM	P43121	646 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	TOB2	Q14106	344 aa	Predicted RBP	13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	ANKRD1	Q15327	319 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	PUM3	Q15397	648 aa	Known RBP	13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	ME3	Q16798	604 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	BICDL1	Q6ZP65	573 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	SMIM5	Q71RC9	77 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	KLHL34	Q8N239	644 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	NEK1	Q96PY6	1258 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	BCL2L12	Q9HB09	334 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	SEC31B	Q9NQW1	1179 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	TPCN1	Q9ULQ1	816 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	QSER1	Q2KHR3	1735 aa		13.41	□□□□□ -0.26
GFAP-238	ENST00000640859	WDR33	Q9C0J8	1336 aa	Known RBP	13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	SLC10A5	Q5PT55	438 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	STOX1	Q6ZVD7	989 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	AMIGO3	Q86WK7	504 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	CCDC83	Q8IWF9	413 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	APPBP2	Q92624	585 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	GZF1	Q9H116	711 aa	Predicted RBP	13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	SMC3	Q9UQE7	1217 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	UBR3	Q6ZT12	1888 aa		13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.4	□□□□□ -0.26
GFAP-238	ENST00000640859	SLC5A1	P13866	664 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	PHKA1	P46020	1223 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	SF3B3	Q15393	1217 aa	Known RBP	13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	KLHL40	Q2TBA0	621 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	CCDC102B	Q68D86	513 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	PI16	Q6UXB8	463 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	HELB	Q8NG08	1087 aa	Predicted RBP	13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	MPHOSPH8	Q99549	860 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	NYX	Q9GZU5	481 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	CARMIL3	Q8ND23	1372 aa		13.39	□□□□□ -0.27
GFAP-238	ENST00000640859	CASZ1	Q86V15	1759 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	IGHMBP2	P38935	993 aa	Known RBP	13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	ST5	P78524	1137 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	TTF1	Q15361	905 aa	Predicted RBP	13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	ERFE	Q4G0M1	354 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	L1TD1	Q5T7N2	865 aa	Known RBP	13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	ZSCAN25	Q6NSZ9	544 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	TPTE2	Q6XPS3	522 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	NECAB1	Q8N987	351 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	TCEANC2	Q96MN5	208 aa		13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	PIH1D3	Q9NQM4	214 aa	Known RBP	13.38	□□□□□ -0.27
GFAP-238	ENST00000640859	COL24A1	Q17RW2	1714 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	FOXP2	O15409	715 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	PRPF40A	O75400	957 aa	Known RBP	13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	HMGB1	P09429	215 aa	Known RBP	13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	ZSCAN22	P10073	491 aa	Predicted RBP	13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	SYT1	P21579	422 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	GJB2	P29033	226 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	ADD2	P35612	726 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	VASP	P50552	380 aa	Predicted RBP	13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	TBC1D9B	Q66K14	1250 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	CNBD1	Q8NA66	436 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	CHAMP1	Q96JM3	812 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	DDX49	Q9Y6V7	483 aa	Known RBP	13.37	□□□□□ -0.27
GFAP-238	ENST00000640859		A0A1B0GUL6	1792 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859	COL4A1	P02462	1669 aa		13.37	□□□□□ -0.27
GFAP-238	ENST00000640859		A0A0G2JLW4	131 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	STX6	O43752	255 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	SERPINB2	P05120	415 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	EXOSC10	Q01780	885 aa	Known RBP	13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	NFIX	Q14938	502 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	UBE3C	Q15386	1083 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	WASHC4	Q2M389	1173 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859		Q6ZUG5	572 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	C3orf67	Q6ZVT6	689 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	DHX32	Q7L7V1	743 aa	Known RBP	13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	CDC5L	Q99459	802 aa	Known RBP	13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	PUS7L	Q9H0K6	701 aa	Known RBP	13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	CTNNA3	Q9UI47	895 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	TCHH	Q07283	1943 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	DOCK2	Q92608	1830 aa		13.36	□□□□□ -0.27
GFAP-238	ENST00000640859	GOLGA6L3	A6NEY3	463 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859		E7EWF7	191 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	PTGER2	P43116	358 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	CHRND	Q07001	517 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	TTLL5	Q6EMB2	1281 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	AGXT2	Q9BYV1	514 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	ISY1	Q9ULR0	285 aa	Known RBP	13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	MTMR6	Q9Y217	621 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	CD2AP	Q9Y5K6	639 aa		13.35	□□□□□ -0.27
GFAP-238	ENST00000640859	TAF1	P21675	1872 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	TCRBV5S4A2T	A0A5A2	114 aa		13.34	□□□□□ -0.27
GFAP-238	ENST00000640859	SNAP23	O00161	211 aa		13.34	□□□□□ -0.27

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