RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 TDO2P48775 406 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 CBX1P83916 185 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 MAP3K12Q12852 859 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 NBPF6Q5VWK0 638 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 TDRD7Q8NHU6 1098 aaKnown RBP6.42□□□□□ -1.38
SCN3A-210ENST00000640652 NBPF4Q96M43 638 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 ABCC6O95255 1503 aa6.42□□□□□ -1.38
SCN3A-210ENST00000640652 PFKFB2O60825 505 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CTAGE1Q96RT6 745 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 TRPM3Q9HCF6 1732 aaPredicted RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CASQ1P31415 396 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CCDC102BQ68D86 513 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CADPS2Q86UW7 1296 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 TCEANC2Q96MN5 208 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 KRT23Q9C075 422 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 MRVI1Q9Y6F6 885 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 C4AP0C0L4 1744 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 C4BP0C0L5 1744 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 ARAP2Q8WZ64 1704 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CNNM3Q8NE01 707 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 LGR6Q9HBX8 967 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 MYO18AQ92614 2054 aaKnown RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 KIF5CO60282 957 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 SSRP1Q08945 709 aaKnown RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 JAKMIP3Q5VZ66 844 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 AOPEPQ8N6M6 819 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CCDC191Q8NCU4 936 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 SUCLG2Q96I99 432 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 SLU7O95391 586 aaKnown RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 GABPB1Q06547 395 aaPredicted RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 MED23Q9ULK4 1368 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 ADCK5Q3MIX3 580 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 TSGA10IPQ3SY00 556 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 ZNF274Q96GC6 653 aaPredicted RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 ORC3Q9UBD5 711 aaPredicted RBP6.41□□□□□ -1.38
SCN3A-210ENST00000640652 GNAT2P19087 354 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 NECTIN1Q15223 517 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 CREBRFQ8IUR6 639 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 C19orf44Q9H6X5 657 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 FBXO3Q9UK99 471 aa6.41□□□□□ -1.38
SCN3A-210ENST00000640652 RIOK3O14730 519 aaKnown RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 IDH1O75874 414 aaKnown RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 TMTC2Q8N394 836 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 CALCOCO1Q9P1Z2 691 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ABCC12Q96J65 1359 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 SALL3Q9BXA9 1300 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 SLC5A1P13866 664 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ZC3H6P61129 1189 aaKnown RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 LEKR1Q6ZMV7 388 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 KRT28Q7Z3Y7 464 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 LRRC59Q96AG4 307 aaKnown RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 EAF2Q96CJ1 260 aaPredicted RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ANGEL1Q9UNK9 670 aaKnown RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 A0A1B0GUL6 1792 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ANKRD18BA2A2Z9 1011 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 UBASH3AP57075 661 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ARHGAP29Q52LW3 1261 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 NAV1Q8NEY1 1877 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 A0A1W2PQ27 194 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 A0A1W2PQ64 194 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 A0A1W2PQD8 194 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 MFSD6Q6ZSS7 791 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 MICU3Q86XE3 530 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ERO1AQ96HE7 468 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 ZNHIT6Q9NWK9 470 aaKnown RBP6.4□□□□□ -1.38
SCN3A-210ENST00000640652 USP16Q9Y5T5 823 aa6.4□□□□□ -1.38
SCN3A-210ENST00000640652 GTF2F1P35269 517 aaKnown RBP eCLIP6.4□□□□□ -1.39
SCN3A-210ENST00000640652 BMS1Q14692 1282 aaKnown RBP6.4□□□□□ -1.39
SCN3A-210ENST00000640652 MAP9Q49MG5 647 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 EHBP1Q8NDI1 1231 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 KLF18A0A0U1RQI7 1052 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 GBP3Q9H0R5 595 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 MAGEC2Q9UBF1 373 aaPredicted RBP6.4□□□□□ -1.39
SCN3A-210ENST00000640652 RTL9Q8NET4 1388 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 POLR3DP05423 398 aaPredicted RBP6.4□□□□□ -1.39
SCN3A-210ENST00000640652 IARSP41252 1262 aaKnown RBP6.4□□□□□ -1.39
SCN3A-210ENST00000640652 ADALQ6DHV7 355 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 ERBB3P21860 1342 aa6.4□□□□□ -1.39
SCN3A-210ENST00000640652 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 PTCD1O75127 700 aaKnown RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 LRRC8AQ8IWT6 810 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 ANKRD12Q6UB98 2062 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 GTF2E1P29083 439 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 RRP12Q5JTH9 1297 aaKnown RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 KIAA1524Q8TCG1 905 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 LRRC2Q9BYS8 371 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 NSFL1CQ9UNZ2 370 aaKnown RBP6.39□□□□□ -1.39
SCN3A-210ENST00000640652 ZBTB43O43298 467 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 PRC1O43663 620 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 CIAO1O76071 339 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 FAM193AP78312 1265 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 TMEM67Q5HYA8 995 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 WDR81Q562E7 1941 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 TAF5LO75529 589 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 LMBR1LQ6UX01 489 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 BPIFA3Q9BQP9 254 aa6.39□□□□□ -1.39
SCN3A-210ENST00000640652 LUC7LQ9NQ29 371 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms