RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CCDC150Q8NCX0 1101 aa20.14■□□□□ 0.81
SCARB2-223ENST00000640640 TM6SF1Q9BZW5 370 aa20.14■□□□□ 0.81
SCARB2-223ENST00000640640 N4BP3O15049 544 aa20.14■□□□□ 0.81
SCARB2-223ENST00000640640 GNPATO15228 680 aa20.14■□□□□ 0.81
SCARB2-223ENST00000640640 TCIRG1Q13488 830 aa20.14■□□□□ 0.81
SCARB2-223ENST00000640640 RDXP35241 583 aaKnown RBP20.13■□□□□ 0.81
SCARB2-223ENST00000640640 HEATR3Q7Z4Q2 680 aa20.13■□□□□ 0.81
SCARB2-223ENST00000640640 RTL9Q8NET4 1388 aa20.13■□□□□ 0.81
SCARB2-223ENST00000640640 DTNBO60941 627 aa20.13■□□□□ 0.81
SCARB2-223ENST00000640640 TMCO3Q6UWJ1 677 aa20.13■□□□□ 0.81
SCARB2-223ENST00000640640 ZKSCAN3Q9BRR0 538 aa20.13■□□□□ 0.81
SCARB2-223ENST00000640640 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
SCARB2-223ENST00000640640 NCOA5Q9HCD5 579 aaKnown RBP20.13■□□□□ 0.81
SCARB2-223ENST00000640640 ATL3Q6DD88 541 aa20.13■□□□□ 0.81
SCARB2-223ENST00000640640 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
SCARB2-223ENST00000640640 JAG2Q9Y219 1238 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 SNW1Q13573 536 aaKnown RBP20.12■□□□□ 0.81
SCARB2-223ENST00000640640 NOLC1Q14978 699 aaKnown RBP eCLIP20.12■□□□□ 0.81
SCARB2-223ENST00000640640 TAF4BQ92750 862 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 UNC13BO14795 1591 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 ERLIN2O94905 339 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 SKILP12757 684 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 CASQ1P31415 396 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 FEZ1Q99689 392 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 LLPHQ9BRT6 129 aaKnown RBP20.12■□□□□ 0.81
SCARB2-223ENST00000640640 CALML3P27482 149 aa20.12■□□□□ 0.81
SCARB2-223ENST00000640640 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
SCARB2-223ENST00000640640 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 LDHBP07195 334 aaKnown RBP20.11■□□□□ 0.81
SCARB2-223ENST00000640640 TTLL7Q6ZT98 887 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 LPIN2Q92539 896 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 TMEM87BQ96K49 555 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 DENND2AQ9ULE3 1009 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
SCARB2-223ENST00000640640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCARB2-223ENST00000640640 PALD1Q9ULE6 856 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 RMND1Q9NWS8 449 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 CWC15Q9P013 229 aaKnown RBP20.11■□□□□ 0.81
SCARB2-223ENST00000640640 CCDC66A2RUB6 948 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 PICALMQ13492 652 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 TDRD12Q587J7 1177 aaKnown RBP20.11■□□□□ 0.81
SCARB2-223ENST00000640640 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
SCARB2-223ENST00000640640 TMEM94Q12767 1356 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 ZAP70P43403 619 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 TAF5LO75529 589 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 STAT6P42226 847 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 ENOX2Q16206 610 aaKnown RBP20.1■□□□□ 0.81
SCARB2-223ENST00000640640 RRAGBQ5VZM2 374 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 DHX58Q96C10 678 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 LEKR1Q6ZMV7 388 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 ARMT1Q9H993 441 aa20.1■□□□□ 0.81
SCARB2-223ENST00000640640 PLCG2P16885 1265 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 NAPAP54920 295 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 WWC2Q6AWC2 1192 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 A0A1B0GVL5 298 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 GOLGA6L9A6NEM1 432 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 HS1BP3Q53T59 392 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 RBSNQ9H1K0 784 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 ERBB4Q15303 1308 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 GOLGA6L10A6NI86 522 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 CCDC40Q4G0X9 1142 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 STAP2Q9UGK3 403 aa20.09■□□□□ 0.81
SCARB2-223ENST00000640640 USO1O60763 962 aaKnown RBP20.08■□□□□ 0.81
SCARB2-223ENST00000640640 BRD1O95696 1058 aa20.08■□□□□ 0.81
SCARB2-223ENST00000640640 OSBPL3Q9H4L5 887 aa20.08■□□□□ 0.81
SCARB2-223ENST00000640640 A0A0D9SFI3 127 aa20.08■□□□□ 0.81
SCARB2-223ENST00000640640 LUZP1Q86V48 1076 aa20.08■□□□□ 0.81
SCARB2-223ENST00000640640 VPS36Q86VN1 386 aa20.08■□□□□ 0.81
SCARB2-223ENST00000640640 LMBRD1Q9NUN5 540 aa20.08■□□□□ 0.81
SCARB2-223ENST00000640640 PTH1RQ03431 593 aa20.08■□□□□ 0.8
SCARB2-223ENST00000640640 FAM114A1Q8IWE2 563 aa20.08■□□□□ 0.8
SCARB2-223ENST00000640640 GBP3Q9H0R5 595 aa20.08■□□□□ 0.8
SCARB2-223ENST00000640640 RNF17Q9BXT8 1623 aaKnown RBP20.07■□□□□ 0.8
SCARB2-223ENST00000640640 FAM160A1Q05DH4 1040 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 SIRT2Q8IXJ6 389 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 SPAG1Q07617 926 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 EXOC1Q9NV70 894 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 KRT2P35908 639 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 CEP135Q66GS9 1140 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 CCDC102AQ96A19 550 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 TMX1Q9H3N1 280 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 EHMT1Q9H9B1 1298 aa20.07■□□□□ 0.8
SCARB2-223ENST00000640640 HIBADHP31937 336 aaKnown RBP20.07■□□□□ 0.8
SCARB2-223ENST00000640640 CCNL1Q9UK58 526 aaPredicted RBP20.07■□□□□ 0.8
SCARB2-223ENST00000640640 GNG11P61952 73 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 TCERG1LQ5VWI1 586 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 LRRC27Q9C0I9 530 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 KRI1Q8N9T8 703 aaKnown RBP20.06■□□□□ 0.8
SCARB2-223ENST00000640640 DSCC1Q9BVC3 393 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 COPRSQ9NQ92 184 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 TFCP2L1Q9NZI6 479 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 MATR3P43243 847 aaKnown RBP eCLIP20.06■□□□□ 0.8
SCARB2-223ENST00000640640 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 C6orf50Q9HD87 102 aa20.06■□□□□ 0.8
SCARB2-223ENST00000640640 ZNF445P59923 1031 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms