RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 NPHP1O15259 732 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 HAND2P61296 217 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-230ENST00000639083 DDX49Q9Y6V7 483 aaKnown RBP12.81□□□□□ -0.36
TARDBP-230ENST00000639083 SBF2Q86WG5 1849 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 SCN7AQ01118 1682 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 TCRBV5S4A2TA0A5A2 114 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 STX6O43752 255 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 RPS8P62241 208 aaKnown RBP12.81□□□□□ -0.36
TARDBP-230ENST00000639083 FGD1P98174 961 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 BRF1Q92994 677 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 LAMB2P55268 1798 aa12.81□□□□□ -0.36
TARDBP-230ENST00000639083 LY75O60449 1722 aa12.8□□□□□ -0.36
TARDBP-230ENST00000639083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
TARDBP-230ENST00000639083 GYG1P46976 350 aa12.8□□□□□ -0.36
TARDBP-230ENST00000639083 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
TARDBP-230ENST00000639083 NFIXQ14938 502 aa12.8□□□□□ -0.36
TARDBP-230ENST00000639083 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
TARDBP-230ENST00000639083 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
TARDBP-230ENST00000639083 MAP3K12Q12852 859 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 UBE4AQ14139 1066 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 CHST3Q7LGC8 479 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 C4BP0C0L5 1744 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 TAF1P21675 1872 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 TM4SF1P30408 202 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
TARDBP-230ENST00000639083 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
TARDBP-230ENST00000639083 ZNF213O14771 459 aa12.78□□□□□ -0.36
TARDBP-230ENST00000639083 APPP05067 770 aa12.78□□□□□ -0.36
TARDBP-230ENST00000639083 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
TARDBP-230ENST00000639083 ADRA2BP18089 450 aa12.78□□□□□ -0.36
TARDBP-230ENST00000639083 NCLP19338 710 aaKnown RBP12.78□□□□□ -0.36
TARDBP-230ENST00000639083 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
TARDBP-230ENST00000639083 APOBRQ0VD83 1088 aa12.77□□□□□ -0.36
TARDBP-230ENST00000639083 CAVIN4Q5BKX8 364 aa12.77□□□□□ -0.36
TARDBP-230ENST00000639083 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.36
TARDBP-230ENST00000639083 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.36
TARDBP-230ENST00000639083 GTF3C6Q969F1 213 aa12.77□□□□□ -0.36
TARDBP-230ENST00000639083 AGXT2Q9BYV1 514 aa12.77□□□□□ -0.36
TARDBP-230ENST00000639083 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.36
TARDBP-230ENST00000639083 ARAP2Q8WZ64 1704 aa12.77□□□□□ -0.37
TARDBP-230ENST00000639083 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
TARDBP-230ENST00000639083 CARMIL3Q8ND23 1372 aa12.77□□□□□ -0.37
TARDBP-230ENST00000639083 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
TARDBP-230ENST00000639083 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.37
TARDBP-230ENST00000639083 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
TARDBP-230ENST00000639083 GNL3LQ9NVN8 582 aaKnown RBP12.77□□□□□ -0.37
TARDBP-230ENST00000639083 MTMR6Q9Y217 621 aa12.77□□□□□ -0.37
TARDBP-230ENST00000639083 MYO5AQ9Y4I1 1855 aaKnown RBP12.77□□□□□ -0.37
TARDBP-230ENST00000639083 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-230ENST00000639083 F13A1P00488 732 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 GYS1P13807 737 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 KLRK1P26718 216 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 SCRN1Q12765 414 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 PROM2Q8N271 834 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 GPT2Q8TD30 523 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 ABCF2Q9UG63 623 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 JAK2O60674 1132 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 MBD4O95243 580 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
TARDBP-230ENST00000639083 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
TARDBP-230ENST00000639083 MYH7P12883 1935 aa12.75□□□□□ -0.37
TARDBP-230ENST00000639083 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
TARDBP-230ENST00000639083 GOLGA6L3A6NEY3 463 aa12.75□□□□□ -0.37
TARDBP-230ENST00000639083 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
TARDBP-230ENST00000639083 ANKRD2Q9GZV1 360 aa12.75□□□□□ -0.37
TARDBP-230ENST00000639083 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
TARDBP-230ENST00000639083 FSD2A1L4K1 749 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 PFKFB2O60825 505 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 FBXO33Q7Z6M2 555 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 NCOA7Q8NI08 942 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 DENND2AQ9ULE3 1009 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 PRC1O43663 620 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 PRKAB2O43741 272 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 PDCP20941 246 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 MCM5P33992 734 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 RALYLQ86SE5 291 aaKnown RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 IFNL3Q8IZI9 196 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 LCORLQ8N3X6 602 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 MIGA1Q8NAN2 632 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 EPB41L4AQ9HCS5 686 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-230ENST00000639083 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
TARDBP-230ENST00000639083 CYP7A1P22680 504 aa12.73□□□□□ -0.37
TARDBP-230ENST00000639083 RBM6P78332 1123 aaKnown RBP12.73□□□□□ -0.37
TARDBP-230ENST00000639083 ADGRA1Q86SQ6 560 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms