RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	NUAK1	O60285	661 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	MICAL2	O94851	1124 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	PTPRA	P18433	802 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	DGKZ	Q13574	1117 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	TRIM50	Q86XT4	487 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	RGL4	Q8IZJ4	473 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	DEPDC4	Q8N2C3	294 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	SMG8	Q8ND04	991 aa	Known RBP	3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	RASSF4	Q9H2L5	321 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	ZCCHC4	Q9H5U6	513 aa		3.36	□□□□□ -1.87
LMBR1-222	ENST00000638959	TCAF2	A6NFQ2	919 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959		M0R2N6	131 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	TMEM253	P0C7T8	217 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	DRD2	P14416	443 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	ATP1A2	P50993	1020 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	NFIX	Q14938	502 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	PLD6	Q8N2A8	252 aa	Known RBP	3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	FBXO15	Q8NCQ5	510 aa	Predicted RBP	3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	EZH1	Q92800	747 aa	Predicted RBP	3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	WNT8B	Q93098	351 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	TMPRSS13	Q9BYE2	586 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	SUGCT	Q9HAC7	445 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	OSGEP	Q9NPF4	335 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	PITPNM2	Q9BZ72	1349 aa		3.35	□□□□□ -1.87
LMBR1-222	ENST00000638959	OVOL3	O00110	214 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	OPLAH	O14841	1288 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	RAB6A	P20340	208 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	SOX11	P35716	441 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	ARL4D	P49703	201 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	NFKB2	Q00653	900 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	HYAL2	Q12891	473 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	MAP7	Q14244	749 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	COL13A1	Q5TAT6	717 aa	Predicted RBP	3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	ATG14	Q6ZNE5	492 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	GAS2L2	Q8NHY3	880 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	USP26	Q9BXU7	913 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	CD320	Q9NPF0	282 aa		3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	RBM19	Q9Y4C8	960 aa	Known RBP	3.34	□□□□□ -1.87
LMBR1-222	ENST00000638959	USP17L5	A8MUK1	530 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	ZBTB7B	O15156	539 aa	Predicted RBP	3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	ADRB1	P08588	477 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	NFIC	P08651	508 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	BMP7	P18075	431 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	ANGEL2	Q5VTE6	544 aa	Known RBP	3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	SLC23A3	Q6PIS1	610 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	VSIG10	Q8N0Z9	540 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	C2CD4A	Q8NCU7	369 aa	Predicted RBP	3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	NETO1	Q8TDF5	533 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	DIRC2	Q96SL1	478 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	VAV3	Q9UKW4	847 aa		3.33	□□□□□ -1.88
LMBR1-222	ENST00000638959	GLI1	P08151	1106 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	SCNN1A	P37088	669 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	CLDN10	P78369	228 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	PRKCQ	Q04759	706 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	SKOR2	Q2VWA4	1001 aa	Predicted RBP	3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	NLRP13	Q86W25	1043 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	PBX4	Q9BYU1	374 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	NSUN3	Q9H649	340 aa	Known RBP	3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	PRDM7	Q9NQW5	492 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	KCNMB2	Q9Y691	235 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	CNTNAP4	Q9C0A0	1308 aa		3.32	□□□□□ -1.88
LMBR1-222	ENST00000638959	LINC00310	P59036	64 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	C19orf57	Q0VDD7	668 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	AOC3	Q16853	763 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	WASHC4	Q2M389	1173 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	CYP27C1	Q4G0S4	372 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	FYB2	Q5VWT5	728 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	FAM181A	Q8N9Y4	354 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	OR13H1	Q8NG92	308 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	HRASLS5	Q96KN8	279 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	IRF2BPL	Q9H1B7	796 aa		3.31	□□□□□ -1.88
LMBR1-222	ENST00000638959	LOC100289279	A0A1B0GTE1	492 aa		3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	ABL2	P42684	1182 aa		3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	AFM	P43652	599 aa		3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	SOX4	Q06945	474 aa	Predicted RBP	3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	ZXDC	Q2QGD7	858 aa	Predicted RBP	3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	OGFOD3	Q6PK18	319 aa		3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	NFATC2IP	Q8NCF5	419 aa		3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	ZNF594	Q96JF6	807 aa	Predicted RBP	3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	POP1	Q99575	1024 aa	Known RBP	3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	SEMA6C	Q9H3T2	930 aa		3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	SMG5	Q9UPR3	1016 aa	Known RBP	3.3	□□□□□ -1.88
LMBR1-222	ENST00000638959	PALM3	A6NDB9	673 aa	Predicted RBP	3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	CELA3B	P08861	270 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	IFI16	Q16666	785 aa	Known RBP	3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	C11orf91	Q3C1V1	193 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	TMEM67	Q5HYA8	995 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	EXOSC6	Q5RKV6	272 aa	Known RBP	3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	HGSNAT	Q68CP4	663 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	ARHGAP27	Q6ZUM4	889 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	NCAPG2	Q86XI2	1143 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	TREML1	Q86YW5	311 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	SIX5	Q8N196	739 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	LARGE2	Q8N3Y3	721 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	OGFOD1	Q8N543	542 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	CXorf38	Q8TB03	319 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	KIRREL1	Q96J84	757 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	QTRT2	Q9H974	415 aa	Known RBP	3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	RTEL1	Q9NZ71	1219 aa		3.29	□□□□□ -1.88
LMBR1-222	ENST00000638959	CTNND2	Q9UQB3	1225 aa		3.29	□□□□□ -1.88

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