RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 SF3B3Q15393 1217 aaKnown RBP8.77□□□□□ -1
RTTN-213ENST00000638799 CLEC17AQ6ZS10 378 aa8.77□□□□□ -1
RTTN-213ENST00000638799 NBPF5PQ86XG9 351 aaPredicted RBP8.77□□□□□ -1
RTTN-213ENST00000638799 CCDC83Q8IWF9 413 aa8.77□□□□□ -1
RTTN-213ENST00000638799 C4AP0C0L4 1744 aa8.77□□□□□ -1
RTTN-213ENST00000638799 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 TRIM37O94972 964 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 SLC5A1P13866 664 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 PSMA5P28066 241 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 RASGRF1Q13972 1273 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 DSCC1Q9BVC3 393 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 MYH7P12883 1935 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 IDH1O75874 414 aaKnown RBP8.77□□□□□ -1.01
RTTN-213ENST00000638799 SLC10A5Q5PT55 438 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 SLC51AQ86UW1 340 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
RTTN-213ENST00000638799 HSP90B1P14625 803 aaKnown RBP8.76□□□□□ -1.01
RTTN-213ENST00000638799 RFC4P35249 363 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 TRAPPC3LQ5T215 181 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 SLC9C2Q5TAH2 1124 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 MCTP1Q6DN14 999 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 RNF214Q8ND24 703 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 NEK1Q96PY6 1258 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 LRRC2Q9BYS8 371 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
RTTN-213ENST00000638799 COL24A1Q17RW2 1714 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 UQCRHLA0A096LP55 91 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 BRD1O95696 1058 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 UQCRHP07919 91 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 KIAA2012Q0VF49 1180 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 KRT27Q7Z3Y8 459 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 TICAM2Q86XR7 235 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 ANKRD18AQ8IVF6 992 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 SPATA5Q8NB90 893 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
RTTN-213ENST00000638799 ZFYP08048 801 aaPredicted RBP8.76□□□□□ -1.01
RTTN-213ENST00000638799 ADD2P35612 726 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 ZNF771Q7L3S4 317 aaPredicted RBP8.76□□□□□ -1.01
RTTN-213ENST00000638799 APPBP2Q92624 585 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 LAMA4Q16363 1823 aa8.76□□□□□ -1.01
RTTN-213ENST00000638799 GPAA1O43292 621 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 MINPP1Q9UNW1 487 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.75□□□□□ -1.01
RTTN-213ENST00000638799 RGL2O15211 777 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 UQCRFS1P1P0C7P4 283 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 HAND2P61296 217 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 BSDC1Q9NW68 430 aaPredicted RBP8.75□□□□□ -1.01
RTTN-213ENST00000638799 ZNF532Q9HCE3 1301 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 E7EWF7 191 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 FGAP02671 866 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 PDE6AP16499 860 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 GYG1P46976 350 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 STK3Q13188 491 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 KRT32Q14532 448 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 NFIXQ14938 502 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 TPTE2Q6XPS3 522 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 Q6ZUG5 572 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
RTTN-213ENST00000638799 NYXQ9GZU5 481 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 A0A1B0GUL6 1792 aa8.75□□□□□ -1.01
RTTN-213ENST00000638799 TCRBV5S4A2TA0A5A2 114 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 CHAF1AQ13111 956 aaPredicted RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 CHST3Q7LGC8 479 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 PROM2Q8N271 834 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 NLRP3Q96P20 1036 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.74□□□□□ -1.01
RTTN-213ENST00000638799 KLRK1P26718 216 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 TM4SF1P30408 202 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 LRRFIP1Q32MZ4 808 aaKnown RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 ZSCAN31Q96LW9 406 aaPredicted RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 ALDH8A1Q9H2A2 487 aaPredicted RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 TNRC6CQ9HCJ0 1690 aaKnown RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 GJB2P29033 226 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 SMC3Q9UQE7 1217 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.74□□□□□ -1.01
RTTN-213ENST00000638799 UBR3Q6ZT12 1888 aa8.74□□□□□ -1.01
RTTN-213ENST00000638799 SYT1P21579 422 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 RPS8P62241 208 aaKnown RBP8.73□□□□□ -1.01
RTTN-213ENST00000638799 LMBRD1Q9NUN5 540 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 CBX1P83916 185 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 UBE3CQ15386 1083 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 MAGEB6Q8N7X4 407 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 NPHP1O15259 732 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 BRF1Q92994 677 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 MAP7D2Q96T17 732 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 DENND2AQ9ULE3 1009 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 COL1A1P02452 1464 aaPredicted RBP8.73□□□□□ -1.01
RTTN-213ENST00000638799 PRPF40AO75400 957 aaKnown RBP8.73□□□□□ -1.01
RTTN-213ENST00000638799 GYS1P13807 737 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 EXOSC10Q01780 885 aaKnown RBP8.73□□□□□ -1.01
RTTN-213ENST00000638799 ANKRD1Q15327 319 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 ZSCAN25Q6NSZ9 544 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 CAVIN1Q6NZI2 390 aaKnown RBP8.73□□□□□ -1.01
RTTN-213ENST00000638799 DHX32Q7L7V1 743 aaKnown RBP8.73□□□□□ -1.01
RTTN-213ENST00000638799 NBPF3Q9H094 633 aa8.73□□□□□ -1.01
RTTN-213ENST00000638799 DOCK2Q92608 1830 aa8.72□□□□□ -1.01
RTTN-213ENST00000638799 FAM84BQ96KN1 310 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms