RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
SCARB2-206ENST00000638175 STRN4Q9NRL3 753 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
SCARB2-206ENST00000638175 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
SCARB2-206ENST00000638175 DISP2A7MBM2 1401 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 PLEKHG2Q9H7P9 1386 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 GDF10P55107 478 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 KDF1Q8NAX2 398 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-206ENST00000638175 ETNK1Q9HBU6 452 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 POLKQ9UBT6 870 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
SCARB2-206ENST00000638175 RGPD3A6NKT7 1758 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-206ENST00000638175 RGPD4Q7Z3J3 1758 aa8.37□□□□□ -1.07
SCARB2-206ENST00000638175 COL3A1P02461 1466 aaPredicted RBP8.37□□□□□ -1.07
SCARB2-206ENST00000638175 TNS1Q9HBL0 1735 aaKnown RBP8.37□□□□□ -1.07
SCARB2-206ENST00000638175 INHAP05111 366 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 SSFA2P28290 1259 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 DDX10Q13206 875 aaKnown RBP8.36□□□□□ -1.07
SCARB2-206ENST00000638175 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
SCARB2-206ENST00000638175 TOM1L2Q6ZVM7 507 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
SCARB2-206ENST00000638175 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
SCARB2-206ENST00000638175 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 SLC4A9Q96Q91 983 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 DOT1LQ8TEK3 1739 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 NHSQ6T4R5 1651 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 TNS2Q63HR2 1409 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 ITGB4P16144 1822 aa8.36□□□□□ -1.07
SCARB2-206ENST00000638175 FBLN1P23142 703 aa8.35□□□□□ -1.07
SCARB2-206ENST00000638175 TNNT2P45379 298 aaPredicted RBP8.35□□□□□ -1.07
SCARB2-206ENST00000638175 EPHA4P54764 986 aa8.35□□□□□ -1.07
SCARB2-206ENST00000638175 OCLNQ16625 522 aa8.35□□□□□ -1.07
SCARB2-206ENST00000638175 POLMQ9NP87 494 aaPredicted RBP8.35□□□□□ -1.07
SCARB2-206ENST00000638175 BACH1O14867 736 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 PPM1GO15355 546 aaPredicted RBP8.34□□□□□ -1.07
SCARB2-206ENST00000638175 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 AEBP1Q8IUX7 1158 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 XAGE2Q96GT9 111 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 COL25A1Q9BXS0 654 aaPredicted RBP8.34□□□□□ -1.07
SCARB2-206ENST00000638175 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 GNEQ9Y223 722 aaKnown RBP8.34□□□□□ -1.07
SCARB2-206ENST00000638175 HRH3Q9Y5N1 445 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 DLG5Q8TDM6 1919 aa8.34□□□□□ -1.07
SCARB2-206ENST00000638175 SENP3-EIF4A1A0A087X0R7 540 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 OVOS2A0A0G2JMS6 1433 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 STAU1O95793 577 aaKnown RBP8.33□□□□□ -1.08
SCARB2-206ENST00000638175 ITGA6P23229 1130 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 ATP2B4P23634 1241 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 WEE1P30291 646 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 RALBP1Q15311 655 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 MTFR1Q15390 333 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 FOXD4L5Q5VV16 416 aaPredicted RBP8.33□□□□□ -1.08
SCARB2-206ENST00000638175 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
SCARB2-206ENST00000638175 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
SCARB2-206ENST00000638175 BTAF1O14981 1849 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 MEGF6O75095 1541 aa8.33□□□□□ -1.08
SCARB2-206ENST00000638175 IGSF1Q8N6C5 1336 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 IL2RAP01589 272 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 PTGIRP43119 386 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 MTHFSP49914 203 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 CLN3Q13286 438 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 LTV1Q96GA3 475 aaPredicted RBP8.32□□□□□ -1.08
SCARB2-206ENST00000638175 ARHGEF10LQ9HCE6 1279 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 KDRP35968 1356 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 TOGARAM1Q9Y4F4 1720 aa8.32□□□□□ -1.08
SCARB2-206ENST00000638175 IL2RBP14784 551 aa8.31□□□□□ -1.08
SCARB2-206ENST00000638175 PPP2R1AP30153 589 aa8.31□□□□□ -1.08
SCARB2-206ENST00000638175 FOXK2Q01167 660 aa8.31□□□□□ -1.08
SCARB2-206ENST00000638175 EIF4A2Q14240 407 aaKnown RBP8.31□□□□□ -1.08
SCARB2-206ENST00000638175 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
SCARB2-206ENST00000638175 CFAP53Q96M91 514 aa8.31□□□□□ -1.08
SCARB2-206ENST00000638175 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
SCARB2-206ENST00000638175 RREB1Q92766 1687 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 ADAMTS7Q9UKP4 1686 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 MYBBP1AQ9BQG0 1328 aaKnown RBP8.3□□□□□ -1.08
SCARB2-206ENST00000638175 BCL9O00512 1426 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 IGFBP4P22692 258 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 GSK3AP49840 483 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 DDB1Q16531 1140 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 NBPF6Q5VWK0 638 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 KRT27Q7Z3Y8 459 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 GAS2L2Q8NHY3 880 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 RAPGEF4Q8WZA2 1011 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 NBPF4Q96M43 638 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 RAB6BQ9NRW1 208 aa8.3□□□□□ -1.08
SCARB2-206ENST00000638175 LY75O60449 1722 aa8.29□□□□□ -1.08
SCARB2-206ENST00000638175 A0A1W2PRU2 124 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms