RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 GLIS2Q9BZE0 524 aaPredicted RBP15.54■□□□□ 0.08
CLN6-225ENST00000638144 COL1A1P02452 1464 aaPredicted RBP15.53■□□□□ 0.08
CLN6-225ENST00000638144 SASH1O94885 1247 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 APLP1P51693 650 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 ZNF280AP59817 542 aaPredicted RBP15.53■□□□□ 0.08
CLN6-225ENST00000638144 POLA2Q14181 598 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.53■□□□□ 0.08
CLN6-225ENST00000638144 SSH3Q8TE77 659 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 LPIN2Q92539 896 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 MYOZ2Q9NPC6 264 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 DDX19BQ9UMR2 479 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 SCAF8Q9UPN6 1271 aaKnown RBP15.53■□□□□ 0.08
CLN6-225ENST00000638144 PCDHAC2Q9Y5I4 1007 aa15.53■□□□□ 0.08
CLN6-225ENST00000638144 MYO3BQ8WXR4 1341 aa15.52■□□□□ 0.08
CLN6-225ENST00000638144 FRAT2O75474 233 aaPredicted RBP15.52■□□□□ 0.08
CLN6-225ENST00000638144 OS9Q13438 667 aaPredicted RBP15.52■□□□□ 0.08
CLN6-225ENST00000638144 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
CLN6-225ENST00000638144 GGA3Q9NZ52 723 aa15.52■□□□□ 0.08
CLN6-225ENST00000638144 TRPM7Q96QT4 1865 aa15.52■□□□□ 0.07
CLN6-225ENST00000638144 ADM5C9JUS6 153 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 PHKA1P46020 1223 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
CLN6-225ENST00000638144 TIMM10P62072 90 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 G3BP1Q13283 466 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLN6-225ENST00000638144 PDE3AQ14432 1141 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 GRIK5Q16478 980 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 NBPF9Q3BBW0 867 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 MFSD14BQ5SR56 506 aa15.51■□□□□ 0.07
CLN6-225ENST00000638144 FAM205AQ6ZU69 1335 aa15.5■□□□□ 0.07
CLN6-225ENST00000638144 A0A1B0GUL7 405 aa15.5■□□□□ 0.07
CLN6-225ENST00000638144 SURF6O75683 361 aaKnown RBP15.5■□□□□ 0.07
CLN6-225ENST00000638144 SCARF1Q14162 830 aa15.5■□□□□ 0.07
CLN6-225ENST00000638144 ANGEL2Q5VTE6 544 aaKnown RBP15.5■□□□□ 0.07
CLN6-225ENST00000638144 USP48Q86UV5 1035 aa15.5■□□□□ 0.07
CLN6-225ENST00000638144 ZNF408Q9H9D4 720 aa15.5■□□□□ 0.07
CLN6-225ENST00000638144 ZBTB40Q9NUA8 1239 aa15.5■□□□□ 0.07
CLN6-225ENST00000638144 AOX1Q06278 1338 aa15.49■□□□□ 0.07
CLN6-225ENST00000638144 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
CLN6-225ENST00000638144 NEUROD6Q96NK8 337 aa15.49■□□□□ 0.07
CLN6-225ENST00000638144 PGAP2Q9UHJ9 254 aa15.49■□□□□ 0.07
CLN6-225ENST00000638144 EXOC6BQ9Y2D4 811 aa15.49■□□□□ 0.07
CLN6-225ENST00000638144 KRT26Q7Z3Y9 468 aa15.48■□□□□ 0.07
CLN6-225ENST00000638144 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
CLN6-225ENST00000638144 ZC3H15Q8WU90 426 aaKnown RBP15.48■□□□□ 0.07
CLN6-225ENST00000638144 XAGE2Q96GT9 111 aa15.48■□□□□ 0.07
CLN6-225ENST00000638144 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
CLN6-225ENST00000638144 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
CLN6-225ENST00000638144 APBB1O00213 710 aa15.47■□□□□ 0.07
CLN6-225ENST00000638144 WNT10BO00744 389 aa15.47■□□□□ 0.07
CLN6-225ENST00000638144 CCDC102BQ68D86 513 aa15.47■□□□□ 0.07
CLN6-225ENST00000638144 DCPSQ96C86 337 aaKnown RBP15.47■□□□□ 0.07
CLN6-225ENST00000638144 HDAC9Q9UKV0 1011 aa15.47■□□□□ 0.07
CLN6-225ENST00000638144 TTF2Q9UNY4 1162 aaKnown RBP15.47■□□□□ 0.07
CLN6-225ENST00000638144 TMEM88BA6NKF7 163 aa15.46■□□□□ 0.07
CLN6-225ENST00000638144 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.07
CLN6-225ENST00000638144 RBM5P52756 815 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLN6-225ENST00000638144 FKBP1AP62942 108 aaKnown RBP15.46■□□□□ 0.07
CLN6-225ENST00000638144 CFAP100Q494V2 611 aa15.46■□□□□ 0.07
CLN6-225ENST00000638144 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
CLN6-225ENST00000638144 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
CLN6-225ENST00000638144 MKRN1Q9UHC7 482 aaKnown RBP15.46■□□□□ 0.07
CLN6-225ENST00000638144 AKAP2Q9Y2D5 859 aa15.46■□□□□ 0.07
CLN6-225ENST00000638144 CLRN2A0PK11 232 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 RASGRF1Q13972 1273 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 CST9Q5W186 159 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 PI16Q6UXB8 463 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 SULF1Q8IWU6 871 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 DNAJC5GQ8N7S2 189 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 ZBED3Q96IU2 234 aaPredicted RBP15.45■□□□□ 0.06
CLN6-225ENST00000638144 CRBNQ96SW2 442 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 DBNDD2Q9BQY9 259 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
CLN6-225ENST00000638144 TLR7Q9NYK1 1049 aaKnown RBP15.45■□□□□ 0.06
CLN6-225ENST00000638144 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
CLN6-225ENST00000638144 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
CLN6-225ENST00000638144 PCNTO95613 3336 aa15.44■□□□□ 0.06
CLN6-225ENST00000638144 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
CLN6-225ENST00000638144 ABT1Q9ULW3 272 aaKnown RBP15.44■□□□□ 0.06
CLN6-225ENST00000638144 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
CLN6-225ENST00000638144 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
CLN6-225ENST00000638144 PRDX5P30044 214 aa15.43■□□□□ 0.06
CLN6-225ENST00000638144 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
CLN6-225ENST00000638144 TBC1D22AQ8WUA7 517 aa15.43■□□□□ 0.06
CLN6-225ENST00000638144 CDCA5Q96FF9 252 aa15.43■□□□□ 0.06
CLN6-225ENST00000638144 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
CLN6-225ENST00000638144 CCDC8Q9H0W5 538 aaPredicted RBP15.43■□□□□ 0.06
CLN6-225ENST00000638144 IL1RAPL2Q9NP60 686 aa15.43■□□□□ 0.06
CLN6-225ENST00000638144 HMMRO75330 724 aa15.42■□□□□ 0.06
CLN6-225ENST00000638144 CRKP46108 304 aa15.42■□□□□ 0.06
CLN6-225ENST00000638144 KLRG1Q96E93 195 aa15.42■□□□□ 0.06
CLN6-225ENST00000638144 CHMP4BQ9H444 224 aaKnown RBP15.42■□□□□ 0.06
CLN6-225ENST00000638144 VEZTQ9HBM0 779 aa15.42■□□□□ 0.06
CLN6-225ENST00000638144 DENND2AQ9ULE3 1009 aa15.42■□□□□ 0.06
CLN6-225ENST00000638144 GRM1Q13255 1194 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 DIXDC1Q155Q3 683 aa15.41■□□□□ 0.06
CLN6-225ENST00000638144 PAXIP1Q6ZW49 1069 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms