RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TTLL5Q6EMB2 1281 aa23.45■■□□□ 1.35
SYNGAP1-227ENST00000638142 KCNG4Q8TDN1 519 aa23.45■■□□□ 1.35
SYNGAP1-227ENST00000638142 AOPEPQ8N6M6 819 aa23.45■■□□□ 1.34
SYNGAP1-227ENST00000638142 LINC00301Q8NCQ3 95 aa23.45■■□□□ 1.34
SYNGAP1-227ENST00000638142 SDF4Q9BRK5 362 aa23.45■■□□□ 1.34
SYNGAP1-227ENST00000638142 ZHX1Q9UKY1 873 aaPredicted RBP23.45■■□□□ 1.34
SYNGAP1-227ENST00000638142 CCDC69A6NI79 296 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 YEATS4O95619 227 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 U2AF2P26368 475 aaKnown RBP eCLIP23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 GSDMDP57764 484 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 IMMTQ16891 758 aaKnown RBP23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 ZNF594Q96JF6 807 aaPredicted RBP23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 KCND1Q9NSA2 647 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 POLR3EQ9NVU0 708 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 CEP126Q9P2H0 1117 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 CCZ1BP86790 482 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 CCZ1P86791 482 aaPredicted RBP23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 ARID5BQ14865 1188 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 NYAP1Q6ZVC0 841 aa23.44■■□□□ 1.34
SYNGAP1-227ENST00000638142 KIF20AO95235 890 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 CCDC158Q5M9N0 1113 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 BRAPQ7Z569 592 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 C8orf76Q96K31 380 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 BPIFA3Q9BQP9 254 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 SPDYE4A6NLX3 237 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 PPFIA3O75145 1194 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 STK38Q15208 465 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 PTPN14Q15678 1187 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 CHRNA2Q15822 529 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 FILIP1Q7Z7B0 1213 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 FBXO3Q9UK99 471 aa23.43■■□□□ 1.34
SYNGAP1-227ENST00000638142 SF3A1Q15459 793 aaKnown RBP23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 KIAA1468Q9P260 1216 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 IMPACTQ9P2X3 320 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 UBR2Q8IWV8 1755 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 A0A087WWV3 80 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 A0A1B0GVL5 298 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 NDUFA8P51970 172 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 FKBP4Q02790 459 aaKnown RBP eCLIP23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 ZRSR1Q15695 479 aaKnown RBP23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 FBXO18Q8NFZ0 1043 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 OSBPL5Q9H0X9 879 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 CGNQ9P2M7 1197 aaKnown RBP23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 AKAP2Q9Y2D5 859 aa23.42■■□□□ 1.34
SYNGAP1-227ENST00000638142 PUS3Q9BZE2 481 aaKnown RBP23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 OGFRQ9NZT2 677 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 NWD2Q9ULI1 1742 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 USP27XA6NNY8 438 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 ATF3P18847 181 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 TTC39AQ5SRH9 613 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 MB21D2Q8IYB1 491 aaPredicted RBP23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 RGS22Q8NE09 1264 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 ZBTB3Q9H5J0 574 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 TNS3Q68CZ2 1445 aa23.41■■□□□ 1.34
SYNGAP1-227ENST00000638142 FOXP2O15409 715 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 PRC1O43663 620 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 CABLES1Q8TDN4 633 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 GPHNQ9NQX3 736 aaPredicted RBP23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 CLIC4Q9Y696 253 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 ABCC12Q96J65 1359 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 KLF18A0A0U1RQI7 1052 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 SPTLC2O15270 562 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 A1BGP04217 495 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 WASHC4Q2M389 1173 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 GORABQ5T7V8 394 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 MYSM1Q5VVJ2 828 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 ZNF592Q92610 1267 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 ORC3Q9UBD5 711 aaPredicted RBP23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 WDR19Q8NEZ3 1342 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 CPDO75976 1380 aa23.4■■□□□ 1.34
SYNGAP1-227ENST00000638142 GOLGA8BA8MQT2 603 aa23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 CCDC57Q2TAC2 916 aa23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 CCAR2Q8N163 923 aaKnown RBP23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 ERCC4Q92889 916 aaPredicted RBP23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 HPS5Q9UPZ3 1129 aa23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 PCDH11XQ9BZA7 1347 aa23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 PCDH11YQ9BZA8 1340 aa23.39■■□□□ 1.34
SYNGAP1-227ENST00000638142 ERVV-2B6SEH9 535 aa23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 KIF2AO00139 706 aaPredicted RBP23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 FGAP02671 866 aa23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 NCOA7Q8NI08 942 aa23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 APPBP2Q92624 585 aa23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 DDX17Q92841 729 aaKnown RBP23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 KCPQ6ZWJ8 1503 aa23.39■■□□□ 1.33
SYNGAP1-227ENST00000638142 NEDD4P46934 1319 aa23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 HAND2P61296 217 aa23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 OTUD7BQ6GQQ9 843 aa23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 NBPF11Q86T75 865 aa23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 DDX60Q8IY21 1712 aaKnown RBP23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 DHX8Q14562 1220 aaKnown RBP23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 XAGE2Q96GT9 111 aa23.38■■□□□ 1.33
SYNGAP1-227ENST00000638142 DCCP43146 1447 aa23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 CPLX1O14810 134 aa23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 POLR3DP05423 398 aaPredicted RBP23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 DPCR1Q3MIW9 517 aa23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 SYNE3Q6ZMZ3 975 aa23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 RALYLQ86SE5 291 aaKnown RBP23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 ISCA1Q9BUE6 129 aa23.37■■□□□ 1.33
SYNGAP1-227ENST00000638142 SLC3A2P08195 630 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms