RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 PUM3Q15397 648 aaKnown RBP9.37□□□□□ -0.91
GABRB3-225ENST00000638099 CCDC152Q4G0S7 254 aa9.37□□□□□ -0.91
GABRB3-225ENST00000638099 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
GABRB3-225ENST00000638099 SH2B1Q9NRF2 756 aaPredicted RBP9.37□□□□□ -0.91
GABRB3-225ENST00000638099 AFF2P51816 1311 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 IGHMBP2P38935 993 aaKnown RBP9.36□□□□□ -0.91
GABRB3-225ENST00000638099 GUCY1B3Q02153 619 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 PDE4CQ08493 712 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 SCRN1Q12765 414 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 L1TD1Q5T7N2 865 aaKnown RBP9.36□□□□□ -0.91
GABRB3-225ENST00000638099 FNBP4Q8N3X1 1017 aaPredicted RBP9.36□□□□□ -0.91
GABRB3-225ENST00000638099 MAGEB6Q8N7X4 407 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 ZSCAN31Q96LW9 406 aaPredicted RBP9.36□□□□□ -0.91
GABRB3-225ENST00000638099 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
GABRB3-225ENST00000638099 ABCC12Q96J65 1359 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 NPHP1O15259 732 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 KLRK1P26718 216 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 MIGA1Q8NAN2 632 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 LPIN2Q92539 896 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 APPBP2Q92624 585 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 DSCC1Q9BVC3 393 aa9.36□□□□□ -0.91
GABRB3-225ENST00000638099 DDX60Q8IY21 1712 aaKnown RBP9.36□□□□□ -0.91
GABRB3-225ENST00000638099 SMIM22K7EJ46 135 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 PRKAB2O43741 272 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 SLC5A1P13866 664 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 PDE6AP16499 860 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 RXRAP19793 462 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 FGFR2P21802 821 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 TSGA10IPQ3SY00 556 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 PARP10Q53GL7 1025 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 SPATA5Q8NB90 893 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 RNF214Q8ND24 703 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 ADD2P35612 726 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 KRT32Q14532 448 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 DHX32Q7L7V1 743 aaKnown RBP9.35□□□□□ -0.91
GABRB3-225ENST00000638099 GJD4Q96KN9 370 aaPredicted RBP9.35□□□□□ -0.91
GABRB3-225ENST00000638099 ARMT1Q9H993 441 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 ZNF652Q9Y2D9 606 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 MROH5Q6ZUA9 1318 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 CEBPZQ03701 1054 aaKnown RBP9.35□□□□□ -0.91
GABRB3-225ENST00000638099 NBPF5PQ86XG9 351 aaPredicted RBP9.35□□□□□ -0.91
GABRB3-225ENST00000638099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.35□□□□□ -0.91
GABRB3-225ENST00000638099 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
GABRB3-225ENST00000638099 GTF3C6Q969F1 213 aa9.35□□□□□ -0.91
GABRB3-225ENST00000638099 BTAF1O14981 1849 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
GABRB3-225ENST00000638099 ZPR1O75312 459 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 SEPT12Q8IYM1 358 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 RBSNQ9H1K0 784 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 TFCP2L1Q9NZI6 479 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 MYH7P12883 1935 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 MBD4O95243 580 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 MRE11P49959 708 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 CTDSPL2Q05D32 466 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 ANKRD1Q15327 319 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 IMMTQ16891 758 aaKnown RBP9.34□□□□□ -0.91
GABRB3-225ENST00000638099 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 FAM196AQ6ZSG2 479 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 TBC1D10CQ8IV04 446 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 CCDC144CPQ8IYA2 1237 aa9.34□□□□□ -0.91
GABRB3-225ENST00000638099 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.34□□□□□ -0.91
GABRB3-225ENST00000638099 COL5A3P25940 1745 aaPredicted RBP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 ZNF213O14771 459 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 CTDNEP1O95476 244 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 PTMSP20962 102 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 ARID4AP29374 1257 aaPredicted RBP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 EXOSC10Q01780 885 aaKnown RBP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 ADGRA1Q86SQ6 560 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 ANKRD18AQ8IVF6 992 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 GPR101Q96P66 508 aaPredicted RBP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 SETDB2Q96T68 719 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 FTOQ9C0B1 505 aaKnown RBP eCLIP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 PRC1O43663 620 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 ZFYP08048 801 aaPredicted RBP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 ANTXR2P58335 489 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 SLC4A8Q2Y0W8 1093 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 LRP2BPQ9P2M1 347 aa9.33□□□□□ -0.92
GABRB3-225ENST00000638099 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
GABRB3-225ENST00000638099 TCRBV5S4A2TA0A5A2 114 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 B4E1Z4 1266 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 MYL10Q9BUA6 226 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 RPS6KA4O75676 772 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 PDIA3P30101 505 aaKnown RBP9.32□□□□□ -0.92
GABRB3-225ENST00000638099 RRP12Q5JTH9 1297 aaKnown RBP9.32□□□□□ -0.92
GABRB3-225ENST00000638099 CYB5R4Q7L1T6 521 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 SDR42E1Q8WUS8 393 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 EPB41L4AQ9HCS5 686 aaPredicted RBP9.32□□□□□ -0.92
GABRB3-225ENST00000638099 TOMM22Q9NS69 142 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 NARFQ9UHQ1 456 aa9.32□□□□□ -0.92
GABRB3-225ENST00000638099 MINPP1Q9UNW1 487 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms