RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 ANKRD1Q15327 319 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 PARP10Q53GL7 1025 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 DHX32Q7L7V1 743 aaKnown RBP18.18■□□□□ 0.5
SCN8A-214ENST00000637709 MAGEB6Q8N7X4 407 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 SPATA5Q8NB90 893 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 CELF1Q92879 486 aaKnown RBP18.18■□□□□ 0.5
SCN8A-214ENST00000637709 KDM4AO75164 1064 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 ADD2P35612 726 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
SCN8A-214ENST00000637709 SLC5A1P13866 664 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 PDE6AP16499 860 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 KLRK1P26718 216 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 MIGA1Q8NAN2 632 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 RNF214Q8ND24 703 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 TFIP11Q9UBB9 837 aaKnown RBP18.17■□□□□ 0.5
SCN8A-214ENST00000637709 JAG2Q9Y219 1238 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 RREB1Q92766 1687 aa18.17■□□□□ 0.5
SCN8A-214ENST00000637709 UTRNP46939 3433 aa18.16■□□□□ 0.5
SCN8A-214ENST00000637709 GUCY1B3Q02153 619 aa18.16■□□□□ 0.5
SCN8A-214ENST00000637709 AFF2P51816 1311 aa18.16■□□□□ 0.5
SCN8A-214ENST00000637709 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCN8A-214ENST00000637709 NBPF3Q9H094 633 aa18.16■□□□□ 0.5
SCN8A-214ENST00000637709 PRKAB2O43741 272 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 ARID4AP29374 1257 aaPredicted RBP18.15■□□□□ 0.5
SCN8A-214ENST00000637709 RBSNQ9H1K0 784 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 ARMT1Q9H993 441 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 ABCF2Q9UG63 623 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 BCORQ6W2J9 1755 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 NPHP1O15259 732 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 RXRAP19793 462 aa18.15■□□□□ 0.5
SCN8A-214ENST00000637709 EXOSC10Q01780 885 aaKnown RBP18.15■□□□□ 0.5
SCN8A-214ENST00000637709 IMMTQ16891 758 aaKnown RBP18.15■□□□□ 0.5
SCN8A-214ENST00000637709 GJD4Q96KN9 370 aaPredicted RBP18.15■□□□□ 0.5
SCN8A-214ENST00000637709 CTDNEP1O95476 244 aa18.14■□□□□ 0.5
SCN8A-214ENST00000637709 ZFYP08048 801 aaPredicted RBP18.14■□□□□ 0.5
SCN8A-214ENST00000637709 CEBPZQ03701 1054 aaKnown RBP18.14■□□□□ 0.5
SCN8A-214ENST00000637709 TBC1D10CQ8IV04 446 aa18.14■□□□□ 0.5
SCN8A-214ENST00000637709 ARHGEF1Q92888 912 aaKnown RBP18.14■□□□□ 0.5
SCN8A-214ENST00000637709 LRP5O75197 1615 aa18.14■□□□□ 0.49
SCN8A-214ENST00000637709 SMIM22K7EJ46 135 aa18.14■□□□□ 0.49
SCN8A-214ENST00000637709 ZPR1O75312 459 aa18.14■□□□□ 0.49
SCN8A-214ENST00000637709 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
SCN8A-214ENST00000637709 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
SCN8A-214ENST00000637709 ZNF213O14771 459 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 MBD4O95243 580 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 TCRBV5S4A2TA0A5A2 114 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 SETDB2Q96T68 719 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 SENP2Q9HC62 589 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 GJB4Q9NTQ9 266 aa18.13■□□□□ 0.49
SCN8A-214ENST00000637709 NASPP49321 788 aaPredicted RBP18.12■□□□□ 0.49
SCN8A-214ENST00000637709 ANTXR2P58335 489 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 CTDSPL2Q05D32 466 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 ADGRA1Q86SQ6 560 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 FTOQ9C0B1 505 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCN8A-214ENST00000637709 LRRC4BQ9NT99 713 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 PRC1O43663 620 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 LRRFIP1Q32MZ4 808 aaKnown RBP18.12■□□□□ 0.49
SCN8A-214ENST00000637709 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 CCDC144CPQ8IYA2 1237 aa18.12■□□□□ 0.49
SCN8A-214ENST00000637709 ALDH8A1Q9H2A2 487 aaPredicted RBP18.12■□□□□ 0.49
SCN8A-214ENST00000637709 PTPDC1A2A3K4 754 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 PDIA3P30101 505 aaKnown RBP18.11■□□□□ 0.49
SCN8A-214ENST00000637709 TTF1Q15361 905 aaPredicted RBP18.11■□□□□ 0.49
SCN8A-214ENST00000637709 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
SCN8A-214ENST00000637709 AK7Q96M32 723 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 TFCP2L1Q9NZI6 479 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 LRP2BPQ9P2M1 347 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
SCN8A-214ENST00000637709 B4E1Z4 1266 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 UQCRFS1P1P0C7P4 283 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 ZNF445P59923 1031 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 CLEC4GQ6UXB4 293 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 FAM184AQ8NB25 1140 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
SCN8A-214ENST00000637709 LAMB2P55268 1798 aa18.11■□□□□ 0.49
SCN8A-214ENST00000637709 CNTNAP4Q9C0A0 1308 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.1■□□□□ 0.49
SCN8A-214ENST00000637709 H3BQV1 296 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 TTC6Q86TZ1 520 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
SCN8A-214ENST00000637709 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 RPS6KA4O75676 772 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 MBD3O95983 291 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 HMGB1P09429 215 aaKnown RBP18.1■□□□□ 0.49
SCN8A-214ENST00000637709 CYB5R4Q7L1T6 521 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 RALYLQ86SE5 291 aaKnown RBP18.1■□□□□ 0.49
SCN8A-214ENST00000637709 STRBPQ96SI9 672 aaKnown RBP18.1■□□□□ 0.49
SCN8A-214ENST00000637709 MYL10Q9BUA6 226 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 TACC3Q9Y6A5 838 aa18.1■□□□□ 0.49
SCN8A-214ENST00000637709 ARAP2Q8WZ64 1704 aa18.09■□□□□ 0.49
SCN8A-214ENST00000637709 NEDD4P46934 1319 aa18.09■□□□□ 0.49
SCN8A-214ENST00000637709 KLF18A0A0U1RQI7 1052 aa18.09■□□□□ 0.49
SCN8A-214ENST00000637709 PFKFB2O60825 505 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms