RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 ZBTB9Q96C00 473 aa23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 LTN1O94822 1766 aa23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 SEC31AO94979 1220 aaKnown RBP23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 MAPK8IP2Q13387 824 aaPredicted RBP23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 BMS1Q14692 1282 aaKnown RBP23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 HSP90AB3PQ58FF7 597 aa23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 TMEM51Q9NW97 253 aa23.45■■□□□ 1.34
CACNA1A-243ENST00000637616 KIF2AO00139 706 aaPredicted RBP23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 SPTLC2O15270 562 aa23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 URI1O94763 535 aaPredicted RBP23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 FANCCQ00597 558 aa23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 CCDC150Q8NCX0 1101 aa23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 ZNF496Q96IT1 587 aaPredicted RBP23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 C8orf76Q96K31 380 aa23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 KIF28PB7ZC32 967 aa23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 PNMA6AP0CW24 399 aaPredicted RBP23.44■■□□□ 1.34
CACNA1A-243ENST00000637616 NCAPD2Q15021 1401 aa23.43■■□□□ 1.34
CACNA1A-243ENST00000637616 PLA2G4AP47712 749 aa23.43■■□□□ 1.34
CACNA1A-243ENST00000637616 UTP14AQ9BVJ6 771 aaKnown RBP23.43■■□□□ 1.34
CACNA1A-243ENST00000637616 KCND1Q9NSA2 647 aa23.43■■□□□ 1.34
CACNA1A-243ENST00000637616 GCP02774 474 aa23.43■■□□□ 1.34
CACNA1A-243ENST00000637616 SLIT1O75093 1534 aa23.42■■□□□ 1.34
CACNA1A-243ENST00000637616 CCDC66A2RUB6 948 aa23.42■■□□□ 1.34
CACNA1A-243ENST00000637616 UBXN4Q92575 508 aa23.42■■□□□ 1.34
CACNA1A-243ENST00000637616 AGXT2Q9BYV1 514 aa23.42■■□□□ 1.34
CACNA1A-243ENST00000637616 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
CACNA1A-243ENST00000637616 PSDA5PKW4 1024 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 VGLL3A8MV65 326 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 M0R2C6 588 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 PFKFB1P16118 471 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 ATL3Q6DD88 541 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 ZNF594Q96JF6 807 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 MAST3O60307 1309 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 SH3TC1Q8TE82 1336 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 WDHD1O75717 1129 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 NLRP12P59046 1061 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 ETF1P62495 437 aaKnown RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 ZNF274Q96GC6 653 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 AIFM3Q96NN9 605 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 CARD6Q9BX69 1037 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 GTF2E1P29083 439 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 IRX5P78411 483 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 HSD3B7Q9H2F3 369 aa23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 ORC3Q9UBD5 711 aaPredicted RBP23.41■■□□□ 1.34
CACNA1A-243ENST00000637616 A0A1W2PQ27 194 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 A0A1W2PQ64 194 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 A0A1W2PQD8 194 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 TMEM232C9JQI7 657 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 SERPINC1P01008 464 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 MYSM1Q5VVJ2 828 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 ZCCHC17Q9NP64 241 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 SYNE3Q6ZMZ3 975 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 KCNH5Q8NCM2 988 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 DSCC1Q9BVC3 393 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 MROH7-TTC4A0A0A0MT08 1334 aa23.4■■□□□ 1.34
CACNA1A-243ENST00000637616 KLF18A0A0U1RQI7 1052 aa23.39■■□□□ 1.34
CACNA1A-243ENST00000637616 FKBP4Q02790 459 aaKnown RBP eCLIP23.39■■□□□ 1.34
CACNA1A-243ENST00000637616 CFAP100Q494V2 611 aa23.39■■□□□ 1.34
CACNA1A-243ENST00000637616 ZMYM1Q5SVZ6 1142 aa23.39■■□□□ 1.34
CACNA1A-243ENST00000637616 MNS1Q8NEH6 495 aa23.39■■□□□ 1.34
CACNA1A-243ENST00000637616 UBASH3AP57075 661 aa23.39■■□□□ 1.33
CACNA1A-243ENST00000637616 TIGD1Q96MW7 591 aa23.39■■□□□ 1.33
CACNA1A-243ENST00000637616 HELLSQ9NRZ9 838 aa23.39■■□□□ 1.33
CACNA1A-243ENST00000637616 TPM4P67936 248 aa23.39■■□□□ 1.33
CACNA1A-243ENST00000637616 TRIM65Q6PJ69 517 aa23.39■■□□□ 1.33
CACNA1A-243ENST00000637616 KCNG4Q8TDN1 519 aa23.39■■□□□ 1.33
CACNA1A-243ENST00000637616 GOLGA8BA8MQT2 603 aa23.38■■□□□ 1.33
CACNA1A-243ENST00000637616 LRRC24Q50LG9 513 aa23.38■■□□□ 1.33
CACNA1A-243ENST00000637616 OSBP2Q969R2 916 aa23.38■■□□□ 1.33
CACNA1A-243ENST00000637616 PNOCQ13519 176 aa23.38■■□□□ 1.33
CACNA1A-243ENST00000637616 TMCO3Q6UWJ1 677 aa23.38■■□□□ 1.33
CACNA1A-243ENST00000637616 FBXO18Q8NFZ0 1043 aa23.38■■□□□ 1.33
CACNA1A-243ENST00000637616 NRDCO43847 1150 aa23.37■■□□□ 1.33
CACNA1A-243ENST00000637616 RXRAP19793 462 aa23.37■■□□□ 1.33
CACNA1A-243ENST00000637616 AXDND1Q5T1B0 1012 aaPredicted RBP23.37■■□□□ 1.33
CACNA1A-243ENST00000637616 IFIT1P09914 478 aaKnown RBP23.37■■□□□ 1.33
CACNA1A-243ENST00000637616 ARHGEF25Q86VW2 580 aa23.37■■□□□ 1.33
CACNA1A-243ENST00000637616 NFAT5O94916 1531 aa23.37■■□□□ 1.33
CACNA1A-243ENST00000637616 MRC1P22897 1456 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 HNRNPH2P55795 449 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 WASHC4Q2M389 1173 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 RABL6Q3YEC7 729 aaPredicted RBP23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 ANO1Q5XXA6 986 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 ATG9AQ7Z3C6 839 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 NEK11Q8NG66 645 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 BPIFA3Q9BQP9 254 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 PALLDQ8WX93 1383 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 CPLX1O14810 134 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 POLR3EQ9NVU0 708 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 DENND2AQ9ULE3 1009 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 LAMA4Q16363 1823 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 CLIC6Q96NY7 704 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 LMO7Q8WWI1 1683 aa23.36■■□□□ 1.33
CACNA1A-243ENST00000637616 PRC1O43663 620 aa23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 CYP2C19P33261 490 aa23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 ZC3H6P61129 1189 aaKnown RBP23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 HPS5Q9UPZ3 1129 aa23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 RNF113AO15541 343 aaKnown RBP23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 CCDC34Q96HJ3 373 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms