RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 NDUFA8P51970 172 aa18.02■□□□□ 0.48
CACNA1A-235ENST00000637004 MCMDC2Q4G0Z9 681 aa18.02■□□□□ 0.48
CACNA1A-235ENST00000637004 NEK11Q8NG66 645 aa18.02■□□□□ 0.48
CACNA1A-235ENST00000637004 KAZALD1Q96I82 304 aa18.02■□□□□ 0.48
CACNA1A-235ENST00000637004 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
CACNA1A-235ENST00000637004 LGR6Q9HBX8 967 aa18.02■□□□□ 0.48
CACNA1A-235ENST00000637004 CBFA2T2O43439 604 aa18.02■□□□□ 0.47
CACNA1A-235ENST00000637004 KCNQ3O43525 872 aa18.02■□□□□ 0.47
CACNA1A-235ENST00000637004 FANCCQ00597 558 aa18.02■□□□□ 0.47
CACNA1A-235ENST00000637004 TRERF1Q96PN7 1200 aa18.02■□□□□ 0.47
CACNA1A-235ENST00000637004 CARD6Q9BX69 1037 aa18.02■□□□□ 0.47
CACNA1A-235ENST00000637004 COL15A1P39059 1388 aa18.02■□□□□ 0.47
CACNA1A-235ENST00000637004 EVCP57679 992 aa18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 STK38Q15208 465 aa18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 GPR161Q8N6U8 529 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 MPHOSPH8Q99549 860 aa18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 TRIM34Q9BYJ4 488 aa18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 MED1Q15648 1581 aaPredicted RBP18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 SALL1Q9NSC2 1324 aa18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 NCAPHQ15003 741 aa18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 EDC3Q96F86 508 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 CWC15Q9P013 229 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-235ENST00000637004 APOBRQ0VD83 1088 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 LINC00301Q8NCQ3 95 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 AK7Q96M32 723 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 PARP3Q9Y6F1 533 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 YEATS4O95619 227 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 OAS2P29728 719 aaKnown RBP18■□□□□ 0.47
CACNA1A-235ENST00000637004 SMC1AQ14683 1233 aaKnown RBP18■□□□□ 0.47
CACNA1A-235ENST00000637004 CC2D1AQ6P1N0 951 aaPredicted RBP18■□□□□ 0.47
CACNA1A-235ENST00000637004 KRBA2Q6ZNG9 492 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 AGXT2Q9BYV1 514 aa18■□□□□ 0.47
CACNA1A-235ENST00000637004 GOLGA6L9A6NEM1 432 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 TBC1D8O95759 1140 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 ZC3H6P61129 1189 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 CCT2P78371 535 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 TMX1Q9H3N1 280 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 ARFGAP3Q9NP61 516 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 MYH15Q9Y2K3 1946 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 SEC31AO94979 1220 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 GUCY1B3Q02153 619 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 ZNF274Q96GC6 653 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 SOS2Q07890 1332 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 REXO1L1PQ8IX06 675 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 LRRC59Q96AG4 307 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 POLR3EQ9NVU0 708 aa17.99■□□□□ 0.47
CACNA1A-235ENST00000637004 ZNF609O15014 1411 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 BIN1O00499 593 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 ZSCAN26Q16670 478 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 ABCC6O95255 1503 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 CARMIL3Q8ND23 1372 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 MRC1P22897 1456 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 ZNF202O95125 648 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 UBASH3AP57075 661 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 ST5P78524 1137 aa17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 EXOSC10Q01780 885 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 UTP14AQ9BVJ6 771 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-235ENST00000637004 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 SPTLC2O15270 562 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 ARHGAP6O43182 974 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 MYO1BO43795 1136 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 SERPINC1P01008 464 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 RASSF4Q9H2L5 321 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 SASH3O75995 380 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 JAKMIP3Q5VZ66 844 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 PSD3Q9NYI0 1048 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 NEDD4P46934 1319 aa17.97■□□□□ 0.47
CACNA1A-235ENST00000637004 PDIA3P30101 505 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 CASQ1P31415 396 aa17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 AKAP4Q5JQC9 854 aa17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 EXOC4Q96A65 974 aa17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 SEC62Q99442 399 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 DBNLQ9UJU6 430 aaKnown RBP17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 TNNT3P45378 269 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 CFAP100Q494V2 611 aa17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 RABGGTAQ92696 567 aa17.96■□□□□ 0.47
CACNA1A-235ENST00000637004 TOP1P11387 765 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 MAP3K9P80192 1104 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 GNL2Q13823 731 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 GOLGA5Q8TBA6 731 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 KLHDC4Q8TBB5 520 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 CLIC4Q9Y696 253 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 CMA1P23946 247 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 MYL5Q02045 173 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 CHRNA2Q15822 529 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 TNNI3KQ59H18 835 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 VSTM4Q8IW00 320 aa17.95■□□□□ 0.46
CACNA1A-235ENST00000637004 HAUS7Q99871 368 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms