RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 FANCCQ00597 558 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 PPP2R3AQ06190 1150 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 ERC1Q8IUD2 1116 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 ANKZF1Q9H8Y5 726 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 PPP2R2CQ9Y2T4 447 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 EIF3CLB5ME19 914 aaKnown RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 ZSCAN12O43309 604 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 NRDCO43847 1150 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 SMC2O95347 1197 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 PROSER2Q86WR7 435 aaPredicted RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 FSIP1Q8NA03 581 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 TCEANC2Q96MN5 208 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 ZNF396Q96N95 335 aaPredicted RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 EIF3CQ99613 913 aaKnown RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 PHAXQ9H814 394 aaKnown RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 UTYO14607 1347 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 ZNF589Q86UQ0 364 aaPredicted RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 FBXL16Q8N461 479 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 GPATCH3Q96I76 525 aa8.97□□□□□ -0.97
SCN8A-212ENST00000636945 MYCBPQ99417 103 aaPredicted RBP8.97□□□□□ -0.97
SCN8A-212ENST00000636945 FAM237AA0A1B0GTK4 181 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 PLEKHG3A1L390 1219 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 HOMER1Q86YM7 354 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 GOLGA6L1Q8N7Z2 621 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 GOLGA1Q92805 767 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 INTS13Q9NVM9 706 aa8.96□□□□□ -0.97
SCN8A-212ENST00000636945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.97
SCN8A-212ENST00000636945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.96□□□□□ -0.98
SCN8A-212ENST00000636945 LMAN1P49257 510 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 NDUFA8P51970 172 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 TUBB4BP68371 445 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 TTC31Q49AM3 519 aaPredicted RBP8.96□□□□□ -0.98
SCN8A-212ENST00000636945 NOM1Q5C9Z4 860 aaKnown RBP8.96□□□□□ -0.98
SCN8A-212ENST00000636945 LINC00301Q8NCQ3 95 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 METP08581 1390 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 FLT4P35916 1363 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 SASH1O94885 1247 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 GORABQ5T7V8 394 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 FOXR1Q6PIV2 292 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 LRRC31Q6UY01 552 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 PPM1EQ8WY54 764 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 DPF2Q92785 391 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 NEK1Q96PY6 1258 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 AKAP2Q9Y2D5 859 aa8.96□□□□□ -0.98
SCN8A-212ENST00000636945 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.95□□□□□ -0.98
SCN8A-212ENST00000636945 STX10O60499 249 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 YEATS4O95619 227 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 STK3Q13188 491 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 POLR3EQ9NVU0 708 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 H3BQV1 296 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 EXOSC10Q01780 885 aaKnown RBP8.95□□□□□ -0.98
SCN8A-212ENST00000636945 AXDND1Q5T1B0 1012 aaPredicted RBP8.95□□□□□ -0.98
SCN8A-212ENST00000636945 IFFO2Q5TF58 517 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 Q6ZUG5 572 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 ZBTB9Q96C00 473 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 CEP89Q96ST8 783 aa8.95□□□□□ -0.98
SCN8A-212ENST00000636945 UTP14AQ9BVJ6 771 aaKnown RBP8.95□□□□□ -0.98
SCN8A-212ENST00000636945 RNF216Q9NWF9 866 aaPredicted RBP8.95□□□□□ -0.98
SCN8A-212ENST00000636945 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 TOM1O60784 492 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 CUTAO60888 179 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 ATP1A3P13637 1013 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 HDXQ7Z353 690 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 SRGAP1Q7Z6B7 1085 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 DNAAF4Q8WXU2 420 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-212ENST00000636945 SECISBP2LQ93073 1101 aaKnown RBP8.94□□□□□ -0.98
SCN8A-212ENST00000636945 EAF2Q96CJ1 260 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-212ENST00000636945 ADAMTS13Q76LX8 1427 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 ANKARQ7Z5J8 1434 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 CBFA2T2O43439 604 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 AARSP49588 968 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCN8A-212ENST00000636945 TUBB2AQ13885 445 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 TAF7Q15545 349 aaPredicted RBP8.94□□□□□ -0.98
SCN8A-212ENST00000636945 LEKR1Q6ZMV7 388 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 EYA1Q99502 592 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 TUBB2BQ9BVA1 445 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 LOC102724159A0A0B4J2E5 919 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 PWP2Q15269 919 aaKnown RBP8.94□□□□□ -0.98
SCN8A-212ENST00000636945 EFCAB13Q8IY85 973 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 TC2NQ8N9U0 490 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 FAM71BQ8TC56 605 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 DHX58Q96C10 678 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 PDE11AQ9HCR9 933 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 HPSEQ9Y251 543 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
SCN8A-212ENST00000636945 PTPDC1A2A3K4 754 aa8.93□□□□□ -0.98
SCN8A-212ENST00000636945 ELOA2Q8IYF1 753 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-212ENST00000636945 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
SCN8A-212ENST00000636945 ZNF609O15014 1411 aa8.93□□□□□ -0.98
SCN8A-212ENST00000636945 PIK3C2AO00443 1686 aa8.93□□□□□ -0.98
SCN8A-212ENST00000636945 SHOX2O60902 331 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-212ENST00000636945 CYP21A2P08686 494 aa8.93□□□□□ -0.98
SCN8A-212ENST00000636945 FDPSP14324 419 aaKnown RBP8.93□□□□□ -0.98
SCN8A-212ENST00000636945 HDGFL1Q5TGJ6 251 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms