RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 UBXN1Q04323 297 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 CCDC102BQ68D86 513 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 ATRIPQ8WXE1 791 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 MAPK8IP1Q9UQF2 711 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 MICALCLQ6ZW33 695 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 BANK1Q8NDB2 785 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 RASAL2Q9UJF2 1139 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 SNRPA1P09661 255 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 MAN1A1P33908 653 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 LDHBP07195 334 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 MCM4P33991 863 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 SELENOOQ9BVL4 669 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 RABEP2Q9H5N1 569 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
CACNA1A-227ENST00000636549 ITKQ08881 620 aa20.14■□□□□ 0.82
CACNA1A-227ENST00000636549 GSDMBQ8TAX9 411 aa20.14■□□□□ 0.82
CACNA1A-227ENST00000636549 PRPF31Q8WWY3 499 aaKnown RBP20.14■□□□□ 0.82
CACNA1A-227ENST00000636549 LETM2Q2VYF4 491 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 GADL1Q6ZQY3 521 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 SMCR8Q8TEV9 937 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 GOLGA1Q92805 767 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 MCM3P25205 808 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 MCM6Q14566 821 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 UBLCP1Q8WVY7 318 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 SYNJ2BP-COX16A0A087WUM0 186 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 CCNT1O60563 726 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 ZNF174Q15697 407 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 ZNF710Q8N1W2 664 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 CHMP6Q96FZ7 201 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 COX16Q9P0S2 106 aa20.14■□□□□ 0.81
CACNA1A-227ENST00000636549 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 ESR2Q92731 530 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 GMNNO75496 209 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 CASC4Q6P4E1 433 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 FMNL3Q8IVF7 1028 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 RSPH3Q86UC2 560 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 SKA2Q8WVK7 121 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 TRPC3Q13507 836 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 PPP4R3BQ5MIZ7 849 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 CCDC172P0C7W6 258 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 IFI16Q16666 785 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 FAM98CQ17RN3 349 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 LMBR1LQ6UX01 489 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 SCAND2PQ9GZW5 306 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 KIF9Q9HAQ2 790 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 USP37Q86T82 979 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 LEO1Q8WVC0 666 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 GUCA1BQ9UMX6 200 aa20.13■□□□□ 0.81
CACNA1A-227ENST00000636549 AOPEPQ8N6M6 819 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 KRT23Q9C075 422 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 SUDS3Q9H7L9 328 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 SMC6Q96SB8 1091 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 MAGED2Q9UNF1 606 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 MSH6P52701 1360 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 NCAPH2Q6IBW4 605 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 LARGE2Q8N3Y3 721 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 TAB3Q8N5C8 712 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 FNDC3AQ9Y2H6 1198 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 CCT6AP40227 531 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 ANO6Q4KMQ2 910 aa20.12■□□□□ 0.81
CACNA1A-227ENST00000636549 ZEB2O60315 1214 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 KRT2P35908 639 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 ZGPATQ8N5A5 531 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 TCIRG1Q13488 830 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 LZTFL1Q9NQ48 299 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 SLC4A1P02730 911 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 CTNND2Q9UQB3 1225 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 LRPPRCP42704 1394 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 APBA3O96018 575 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 SEPT10Q9P0V9 454 aa20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 ZHX1Q9UKY1 873 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-227ENST00000636549 IRS4O14654 1257 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 IGBP1P78318 339 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 RHOXF2BP0C7M4 288 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 DCLK2Q8N568 766 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 PKNOX2Q96KN3 472 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 RHOXF2Q9BQY4 288 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 ANKFY1Q9P2R3 1169 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 B4DLN1 442 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 M0QZ92 97 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 HCLS1P14317 486 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 TRIM7Q9C029 511 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 FAM204AQ9H8W3 233 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 WDR44Q5JSH3 913 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 LONRF3Q496Y0 759 aa20.1■□□□□ 0.81
CACNA1A-227ENST00000636549 SH2B1Q9NRF2 756 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms