RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 GRIN2CQ14957 1233 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 LRRC14Q15048 493 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 LRRFIP1Q32MZ4 808 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 LONRF3Q496Y0 759 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 THSD4Q6ZMP0 1018 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GK5Q6ZS86 529 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 FAM196AQ6ZSG2 479 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 EEPD1Q7L9B9 569 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 BTLAQ7Z6A9 289 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 NCAPG2Q86XI2 1143 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 NIM1KQ8IY84 436 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 LRRC47Q8N1G4 583 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PGBD3Q8N328 593 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PAF1Q8N7H5 531 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 CELF2-AS1Q8N7Q2 184 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PHC3Q8NDX5 983 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 ST13P5Q8NFI4 369 aaPredicted RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 SP7Q8TDD2 431 aaPredicted RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 ANKRD24Q8TF21 1146 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 ZNF516Q92618 1163 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 EMID1Q96A84 441 aaPredicted RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 KCTD12Q96CX2 325 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 MFSD3Q96ES6 412 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 SHDQ96IW2 340 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PNMA5Q96PV4 448 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 SLC26A8Q96RN1 970 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 NAP1L4Q99733 375 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 TRIM56Q9BRZ2 755 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 C11orf16Q9NQ32 467 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GOLGA6AQ9NYA3 693 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 ZDHHC3Q9NYG2 299 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GPN3Q9UHW5 284 aaPredicted RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 USP20Q9Y2K6 914 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 LEMD3Q9Y2U8 911 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 CD2APQ9Y5K6 639 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 HRH3Q9Y5N1 445 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PTCH2Q9Y6C5 1203 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 TLL2Q9Y6L7 1015 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 KHNYNO15037 678 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 WDHD1O75717 1129 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 UPP2O95045 317 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 GJB6O95452 261 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 CENPBP07199 599 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 PSAPP07602 524 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 HSP90AA1P07900 732 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 ATF3P18847 181 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 INPP5BP32019 993 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 PHKA2P46019 1235 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 GUCY2FP51841 1108 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 SKOR1P84550 965 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 HNRNPUQ00839 825 aaKnown RBP eCLIP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 RELBQ01201 579 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 SQSTM1Q13501 440 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 UBE4AQ14139 1066 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 C21orf62-AS1Q17RA5 79 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 LONRF2Q1L5Z9 754 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 TKFCQ3LXA3 575 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 BRDTQ58F21 947 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 DALRD3Q5D0E6 543 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 TMEM67Q5HYA8 995 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 TJAP1Q5JTD0 557 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 PERM1Q5SV97 790 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 SLC4A10Q6U841 1118 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 AGMOQ6ZNB7 445 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 LRRC69Q6ZNQ3 347 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 DDX46Q7L014 1031 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 CCDC84Q86UT8 332 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 TRIM42Q8IWZ5 723 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 AHI1Q8N157 1196 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 REXO1Q8N1G1 1221 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 MYO1HQ8N1T3 1032 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 ANKLE1Q8NAG6 615 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 C3orf58Q8NDZ4 430 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 DDX54Q8TDD1 881 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 PNISRQ8TF01 805 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 GATAD2BQ8WXI9 593 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 NINJ1Q92982 152 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 ZNF669Q96BR6 464 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 HSH2DQ96JZ2 352 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 RHOVQ96L33 236 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 MPHOSPH6Q99547 160 aaKnown RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 OSMRQ99650 979 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 CDC6Q99741 560 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 APBA2Q99767 749 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 FHDC1Q9C0D6 1143 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 ZNF395Q9H8N7 513 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 KANSL2Q9H9L4 492 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 CBX8Q9HC52 389 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 POLMQ9NP87 494 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 KCNQ5Q9NR82 932 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 BSDC1Q9NW68 430 aaPredicted RBP2.3□□□□□ -2.04
GABRB3-220ENST00000636512 CNTN3Q9P232 1028 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 CYP8B1Q9UNU6 501 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 BCS1LQ9Y276 419 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 KCNMB2Q9Y691 235 aa2.3□□□□□ -2.04
GABRB3-220ENST00000636512 WASHC2CQ9Y4E1 1318 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 E2F8A0AVK6 867 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 POTEB3A0JP26 581 aa2.29□□□□□ -2.04
GABRB3-220ENST00000636512 IRS4O14654 1257 aaPredicted RBP2.29□□□□□ -2.04
GABRB3-220ENST00000636512 PDE8AO60658 829 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms