RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 PSMD1Q99460 953 aa11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 FHDC1Q9C0D6 1143 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 ZC3H12CQ9C0D7 883 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 COA1Q9GZY4 146 aa11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 CD209Q9NNX6 404 aa11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 PIH1D3Q9NQM4 214 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
CACNA1A-223ENST00000636058 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-223ENST00000636058 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
CACNA1A-223ENST00000636058 ESYT1Q9BSJ8 1104 aa11.6□□□□□ -0.55
CACNA1A-223ENST00000636058 DIAPH3Q9NSV4 1193 aa11.6□□□□□ -0.55
CACNA1A-223ENST00000636058 EIF5BO60841 1220 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 FRAT2O75474 233 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 ZFYP08048 801 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 KIAA2012Q0VF49 1180 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 NMIQ13287 307 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 FAM227BQ96M60 508 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 IL25Q9H293 177 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 WWC3Q9ULE0 1092 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 MAST2Q6P0Q8 1798 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 RAD50Q92878 1312 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 SALL1Q9NSC2 1324 aa11.59□□□□□ -0.55
CACNA1A-223ENST00000636058 CHD4Q14839 1912 aa11.58□□□□□ -0.55
CACNA1A-223ENST00000636058 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 SGSM2O43147 1006 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 CHGBP05060 677 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 ADD2P35612 726 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 ZSCAN25Q6NSZ9 544 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 WDR66Q8TBY9 1149 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 RUFY2Q8WXA3 655 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 VPS33BQ9H267 617 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 BCS1LQ9Y276 419 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 FAM205AQ6ZU69 1335 aa11.58□□□□□ -0.56
CACNA1A-223ENST00000636058 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 IGSF3O75054 1194 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 REC8O95072 547 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 MAP3K12Q12852 859 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 CHAF1AQ13111 956 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 AOC3Q16853 763 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 PODNQ7Z5L7 613 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 LTBP3Q9NS15 1303 aa11.57□□□□□ -0.56
CACNA1A-223ENST00000636058 COL4A5P29400 1685 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 TCRBV5S4A2TA0A5A2 114 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 NFKBIEO00221 500 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 PDE6AP16499 860 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 MCMDC2Q4G0Z9 681 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 APPBP2Q92624 585 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 TAOK3Q9H2K8 898 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 DBNDD1Q9H9R9 158 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 HELLSQ9NRZ9 838 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 ABCF2Q9UG63 623 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 JAG2Q9Y219 1238 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 PSME4Q14997 1843 aa11.56□□□□□ -0.56
CACNA1A-223ENST00000636058 CCDC88AQ3V6T2 1871 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 G3V3G9 751 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 EPB41L2O43491 1005 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 ECE2O60344 883 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 GTF2IP78347 998 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 DCAF8Q5TAQ9 597 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 TMED8Q6PL24 325 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 TBC1D22AQ8WUA7 517 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 SEC62Q99442 399 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 UPF2Q9HAU5 1272 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 RAI14Q9P0K7 980 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 MAST3O60307 1309 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
CACNA1A-223ENST00000636058 PRDX5P30044 214 aa11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 IARSP41252 1262 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 MFSD14BQ5SR56 506 aa11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 SPTY2D1Q68D10 685 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 ZNF384Q8TF68 577 aa11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 NSUN4Q96CB9 384 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 USP26Q9BXU7 913 aa11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 LSG1Q9H089 658 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 PUS7LQ9H0K6 701 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
CACNA1A-223ENST00000636058 CCDC171Q6TFL3 1326 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms