RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 SMTNP53814 917 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 NUTM1Q86Y26 1132 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 ANKRD24Q8TF21 1146 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 ZBTB3Q9H5J0 574 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 MRVI1Q9Y6F6 885 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 ARHGEF40Q8TER5 1519 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 ZBTB16Q05516 673 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 KIFAP3Q92845 792 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 TSHZ2Q9NRE2 1034 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 ORC3Q9UBD5 711 aaPredicted RBP7.15□□□□□ -1.26
GABRB3-218ENST00000635994 IL15P40933 162 aaPredicted RBP7.15□□□□□ -1.26
GABRB3-218ENST00000635994 DNM2P50570 870 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 NAPAP54920 295 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 TPD52P55327 224 aaPredicted RBP7.15□□□□□ -1.26
GABRB3-218ENST00000635994 WDR44Q5JSH3 913 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 UTP14CQ5TAP6 766 aaKnown RBP7.15□□□□□ -1.26
GABRB3-218ENST00000635994 FAM184BQ9ULE4 1060 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 TRPM2O94759 1503 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 ALDH1L1O75891 902 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 STAT6P42226 847 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 CCDC144CPQ8IYA2 1237 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 FLAD1Q8NFF5 587 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 MAK16Q9BXY0 300 aaKnown RBP7.15□□□□□ -1.27
GABRB3-218ENST00000635994 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.15□□□□□ -1.27
GABRB3-218ENST00000635994 ADGRL2O95490 1459 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 KDM5CP41229 1560 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 A2ML1A8K2U0 1454 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 PTPRMP28827 1452 aa7.15□□□□□ -1.27
GABRB3-218ENST00000635994 TNNT1P13805 278 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CUL4BQ13620 913 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CCDC6Q16204 474 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 ATP2B3Q16720 1220 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 MUM1L1Q5H9M0 696 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 IFT74Q96LB3 600 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 NACA2Q9H009 215 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 ZBTB43O43298 467 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 PSMC4P43686 418 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 MXRA7P84157 204 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 FSIP1Q8NA03 581 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 BCCIPQ9P287 314 aaKnown RBP eCLIP7.14□□□□□ -1.27
GABRB3-218ENST00000635994 MTUS1Q9ULD2 1270 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 PLEKHG1Q9ULL1 1385 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 N4BP3O15049 544 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CRCPO75575 148 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 RTN1Q16799 776 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 DPY19L2Q6NUT2 758 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 TTC16Q8NEE8 873 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 TBC1D31Q96DN5 1066 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CCDC87Q9NVE4 849 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 SWAP70Q9UH65 585 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 RIMS1Q86UR5 1692 aaKnown RBP7.14□□□□□ -1.27
GABRB3-218ENST00000635994 HSF2BPO75031 334 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 TACC1O75410 805 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 INF2Q27J81 1249 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 ANKRD13DQ6ZTN6 518 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 MAATS1Q7Z4T9 603 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 URI1O94763 535 aaPredicted RBP7.14□□□□□ -1.27
GABRB3-218ENST00000635994 EEF2P13639 858 aaKnown RBP7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CCT6AP40227 531 aaKnown RBP7.14□□□□□ -1.27
GABRB3-218ENST00000635994 YWHAEP62258 255 aaKnown RBP7.14□□□□□ -1.27
GABRB3-218ENST00000635994 GSTA5Q7RTV2 222 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 CCDC63Q8NA47 563 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 KCNG4Q8TDN1 519 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 NEK1Q96PY6 1258 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 FNBP1Q96RU3 617 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 SLC26A6Q9BXS9 759 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 EXOC6BQ9Y2D4 811 aa7.14□□□□□ -1.27
GABRB3-218ENST00000635994 NOP56O00567 594 aaKnown RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 TNFAIP1Q13829 316 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 PARP10Q53GL7 1025 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 CFAP157Q5JU67 520 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 TRAPPC3LQ5T215 181 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 RNF34Q969K3 372 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 TRIM6Q9C030 488 aaPredicted RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 MTRF1LQ9UGC7 380 aaKnown RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 USP21Q9UK80 565 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 NIP7Q9Y221 180 aaKnown RBP eCLIP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 DISP3Q9P2K9 1392 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 PZPP20742 1482 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 ZNF335Q9H4Z2 1342 aaPredicted RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 ARHGEF10O15013 1369 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 PFDN6O15212 129 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 ZBED4O75132 1171 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 KRT83P78385 493 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 MCM10Q7L590 875 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 CCDC114Q96M63 670 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 ZNF830Q96NB3 372 aaPredicted RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 AZI2Q9H6S1 392 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 FAM204AQ9H8W3 233 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 RBM28Q9NW13 759 aaKnown RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 SLC4A4Q9Y6R1 1079 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 ERVK-7P63135 1459 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 LDHBP07195 334 aaKnown RBP7.13□□□□□ -1.27
GABRB3-218ENST00000635994 TUBBP07437 444 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 PLCB3Q01970 1234 aa7.13□□□□□ -1.27
GABRB3-218ENST00000635994 VWA3BQ502W6 1294 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms