RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 ZMYM4Q5VZL5 1548 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
TCF4-276ENST00000635822 NME9Q86XW9 330 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 RTEL1-TNFRSF6BF6WH68 1400 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 ICE2Q659A1 982 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 CATIPQ7Z7H3 387 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 SLC24A3Q9HC58 644 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 ODF2LQ9ULJ1 636 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 MAPK8IP1Q9UQF2 711 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 MYO1CO00159 1063 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 PSMA7O14818 248 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
TCF4-276ENST00000635822 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
TCF4-276ENST00000635822 ZBTB43O43298 467 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 BICC1Q9H694 974 aaKnown RBP13.11□□□□□ -0.31
TCF4-276ENST00000635822 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 SLC4A8Q2Y0W8 1093 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 KIAA1524Q8TCG1 905 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
TCF4-276ENST00000635822 TRIM31Q9BZY9 425 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
TCF4-276ENST00000635822 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
TCF4-276ENST00000635822 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 TNNC1P63316 161 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
TCF4-276ENST00000635822 CCDC38Q502W7 563 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 CLCN6P51797 869 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 SNCBQ16143 134 aa13.11□□□□□ -0.31
TCF4-276ENST00000635822 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 ETF1P62495 437 aaKnown RBP13.1□□□□□ -0.31
TCF4-276ENST00000635822 TSNAXIP1Q2TAA8 658 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 ZNF202O95125 648 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TMEM266Q2M3C6 531 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 ELP1O95163 1332 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 GUCY2FP51841 1108 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 IFT20Q8IY31 132 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
TCF4-276ENST00000635822 HECW1Q76N89 1606 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 A0A087WZG4 1122 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 A6NNZ2 444 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TSGA10Q9BZW7 698 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 IQCGQ9H095 443 aaKnown RBP13.1□□□□□ -0.31
TCF4-276ENST00000635822 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
TCF4-276ENST00000635822 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■■□□ 17.7
TCF4-276ENST00000635822 PLIN2Q99541 437 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TMCO4Q5TGY1 634 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TUBB2BQ9BVA1 445 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 VCXQ9H320 206 aa13.1□□□□□ -0.31
TCF4-276ENST00000635822 TOP2BQ02880 1626 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 TRMT1LQ7Z2T5 733 aaKnown RBP13.09□□□□□ -0.31
TCF4-276ENST00000635822 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 MRVI1Q9Y6F6 885 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 RNF10Q8N5U6 811 aaKnown RBP13.09□□□□□ -0.31
TCF4-276ENST00000635822 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
TCF4-276ENST00000635822 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 ZNF131P52739 623 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 IFT88Q13099 833 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 VAT1LQ9HCJ6 419 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.09□□□□□ -0.31
TCF4-276ENST00000635822 NLRP12P59046 1061 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 NSFL1CQ9UNZ2 370 aaKnown RBP13.09□□□□□ -0.31
TCF4-276ENST00000635822 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
TCF4-276ENST00000635822 SMIM24O75264 130 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 VAMP4O75379 141 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 NEDD9Q14511 834 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 KCTD16Q68DU8 428 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 MGARPQ8TDB4 240 aa13.09□□□□□ -0.31
TCF4-276ENST00000635822 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
TCF4-276ENST00000635822 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.31
TCF4-276ENST00000635822 RAB3IL1Q8TBN0 382 aa13.08□□□□□ -0.31
TCF4-276ENST00000635822 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
TCF4-276ENST00000635822 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
TCF4-276ENST00000635822 AQRO60306 1485 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCF4-276ENST00000635822 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
TCF4-276ENST00000635822 CCDC77Q9BR77 488 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms