RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 SNX14Q9Y5W7 946 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 CACNA1SQ13698 1873 aa9.02□□□□□ -0.96
SSRP1-205ENST00000635721 CARMIL3Q8ND23 1372 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 PNMA6EA0A0J9YXQ4 647 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 TULP2O00295 520 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 RGL2O15211 777 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 KRT85P78386 507 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 NBPF5PQ86XG9 351 aaPredicted RBP9.02□□□□□ -0.97
SSRP1-205ENST00000635721 KRT222Q8N1A0 295 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 KIF18AQ8NI77 898 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 ERO1AQ96HE7 468 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 L2HGDHQ9H9P8 463 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 PYCARDQ9ULZ3 195 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 SMC3Q9UQE7 1217 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 CDHR2Q9BYE9 1310 aa9.02□□□□□ -0.97
SSRP1-205ENST00000635721 HIP1O00291 1037 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 AP5Z1O43299 807 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 SMARCA5O60264 1052 aaPredicted RBP9.01□□□□□ -0.97
SSRP1-205ENST00000635721 ZNF75DP51815 510 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 MTX1Q13505 466 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 LMBR1LQ6UX01 489 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 TPTE2Q6XPS3 522 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 RUFY3Q7L099 469 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 SLC51AQ86UW1 340 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 CCDC112Q8NEF3 446 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 KLHDC4Q8TBB5 520 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 KIF1BPQ96EK5 621 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 ANO2Q9NQ90 1003 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 CALCOCO1Q9P1Z2 691 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 PARP3Q9Y6F1 533 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 MRVI1Q9Y6F6 885 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 SH3TC1Q8TE82 1336 aa9.01□□□□□ -0.97
SSRP1-205ENST00000635721 PDE8AO60658 829 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 CSF1RP07333 972 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 GTF2E1P29083 439 aaPredicted RBP9□□□□□ -0.97
SSRP1-205ENST00000635721 PTGER2P43116 358 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 ZSCAN25Q6NSZ9 544 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 CNTROBQ8N137 903 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 MSL3Q8N5Y2 521 aaKnown RBP9□□□□□ -0.97
SSRP1-205ENST00000635721 TTLL11Q8NHH1 800 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 PI4K2BQ8TCG2 481 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 CHMP4CQ96CF2 233 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
SSRP1-205ENST00000635721 SGIP1Q9BQI5 828 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 PLA2G12BQ9BX93 195 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 NYXQ9GZU5 481 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 NUP62CLQ9H1M0 184 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 CLSTN2Q9H4D0 955 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 IMPACTQ9P2X3 320 aa9□□□□□ -0.97
SSRP1-205ENST00000635721 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
SSRP1-205ENST00000635721 PA2G4Q9UQ80 394 aaKnown RBP9□□□□□ -0.97
SSRP1-205ENST00000635721 COL11A2P13942 1736 aaPredicted RBP9□□□□□ -0.97
SSRP1-205ENST00000635721 GLRX3O76003 335 aaKnown RBP8.99□□□□□ -0.97
SSRP1-205ENST00000635721 TNNT1P13805 278 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 PSMA5P28066 241 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 RFX5P48382 616 aaPredicted RBP8.99□□□□□ -0.97
SSRP1-205ENST00000635721 AK2P54819 239 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 GSDMDP57764 484 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 TYRO3Q06418 890 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 NECTIN1Q15223 517 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 RABL6Q3YEC7 729 aaPredicted RBP8.99□□□□□ -0.97
SSRP1-205ENST00000635721 CNBD1Q8NA66 436 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 ZNF830Q96NB3 372 aaPredicted RBP8.99□□□□□ -0.97
SSRP1-205ENST00000635721 SRRTQ9BXP5 876 aaKnown RBP8.99□□□□□ -0.97
SSRP1-205ENST00000635721 MTFR1LQ9H019 292 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 OSBPL5Q9H0X9 879 aaPredicted RBP8.99□□□□□ -0.97
SSRP1-205ENST00000635721 GREM2Q9H772 168 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 TMEM51Q9NW97 253 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 CHMP3Q9Y3E7 222 aa8.99□□□□□ -0.97
SSRP1-205ENST00000635721 KIF13BQ9NQT8 1826 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 KIAA1551Q9HCM1 1747 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 NPHP1O15259 732 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 SRGAP3O43295 1099 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 TPM1P09493 284 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 H2AFXP16104 143 aaPredicted RBP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 U2AF2P26368 475 aaKnown RBP eCLIP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 CTSWP56202 376 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 BMS1Q14692 1282 aaKnown RBP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 TIGD1Q96MW7 591 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 DNAJC2Q99543 621 aaKnown RBP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 PUS3Q9BZE2 481 aaKnown RBP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 ZSCAN16Q9H4T2 348 aaPredicted RBP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 HMG20BQ9P0W2 317 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 CYP46A1Q9Y6A2 500 aa8.98□□□□□ -0.97
SSRP1-205ENST00000635721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.98□□□□□ -0.97
SSRP1-205ENST00000635721 CCP110O43303 1012 aa8.97□□□□□ -0.97
SSRP1-205ENST00000635721 MYO1BO43795 1136 aa8.97□□□□□ -0.97
SSRP1-205ENST00000635721 ITGA6P23229 1130 aa8.97□□□□□ -0.97
SSRP1-205ENST00000635721 CHRNA5P30532 468 aa8.97□□□□□ -0.97
SSRP1-205ENST00000635721 ST5P78524 1137 aa8.97□□□□□ -0.97
SSRP1-205ENST00000635721 PTPN12Q05209 780 aaKnown RBP8.97□□□□□ -0.97
SSRP1-205ENST00000635721 IQCB1Q15051 598 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms